New opportunities in plant microbiome engineering for increasing agricultural sustainability under stressful conditions

MS Afridi, MA Javed, S Ali, FHV De Medeiros… - Frontiers in Plant …, 2022 - frontiersin.org
Plant microbiome (or phytomicrobiome) engineering (PME) is an anticipated untapped
alternative strategy that could be exploited for plant growth, health and productivity under …

[HTML][HTML] Challenges and perspectives of metaproteomic data analysis

R Heyer, K Schallert, R Zoun, B Becher, G Saake… - Journal of …, 2017 - Elsevier
In nature microorganisms live in complex microbial communities. Comprehensive taxonomic
and functional knowledge about microbial communities supports medical and technical …

Integrated metagenomic and metaproteomic analyses unravel ammonia toxicity to active methanogens and syntrophs, enzyme synthesis, and key enzymes in …

C Liu, H Huang, X Duan, Y Chen - Environmental Science & …, 2021 - ACS Publications
During anaerobic digestion, the active microbiome synthesizes enzymes by transcription
and translation, and then enzymes catalyze multistep bioconversions of substrates before …

Challenges and approaches in microbiome research: from fundamental to applied

C Sergaki, B Lagunas, I Lidbury, ML Gifford… - Frontiers in Plant …, 2018 - frontiersin.org
We face major agricultural challenges that remain a threat for global food security. Soil
microbes harbor enormous potentials to provide sustainable and economically favorable …

ANPELA: analysis and performance assessment of the label-free quantification workflow for metaproteomic studies

J Tang, J Fu, Y Wang, B Li, Y Li, Q Yang… - Briefings in …, 2020 - academic.oup.com
Label-free quantification (LFQ) with a specific and sequentially integrated workflow of
acquisition technique, quantification tool and processing method has emerged as the …

A review of mechanisms underlying the impacts of (nano) microplastics on anaerobic digestion

SMM Azizi, FI Hai, W Lu, A Al-Mamun, BR Dhar - Bioresource Technology, 2021 - Elsevier
The presence of (nano) microplastics in domestic wastewater and their subsequent release
to the aquatic environment via the discharge of treated sewage has raised significant …

Critical Assessment of MetaProteome Investigation (CAMPI): a multi-laboratory comparison of established workflows

T Van Den Bossche, BJ Kunath, K Schallert… - Nature …, 2021 - nature.com
Metaproteomics has matured into a powerful tool to assess functional interactions in
microbial communities. While many metaproteomic workflows are available, the impact of …

Biogas production: microbiology and technology

A Schnürer - Anaerobes in biotechnology, 2016 - Springer
Biogas, containing energy-rich methane, is produced by microbial decomposition of organic
material under anaerobic conditions. Under controlled conditions, this process can be used …

The microbiome driving anaerobic digestion and microbial analysis

JW Lim, T Park, YW Tong, Z Yu - Advances in bioenergy, 2020 - Elsevier
The microbiome residing in anaerobic digesters drives the anaerobic digestion (AD) process
to convert various feedstocks to biogas as a renewable source of energy. This microbiome …

Metaproteomics insights into traditional fermented foods and beverages

L Yang, W Fan, Y Xu - … Reviews in Food Science and Food …, 2020 - Wiley Online Library
Traditional fermented foods and beverages (TFFB) are important dietary components. Multi‐
omics techniques have been applied to all aspects of TFFB research to clarify the …