Single-cell proteomics enabled by next-generation sequencing or mass spectrometry

HM Bennett, W Stephenson, CM Rose, S Darmanis - Nature Methods, 2023 - nature.com
In the last decade, single-cell RNA sequencing routinely performed on large numbers of
single cells has greatly advanced our understanding of the underlying heterogeneity of …

[HTML][HTML] High-throughput proteomics: a methodological mini-review

M Cui, C Cheng, L Zhang - Laboratory investigation, 2022 - Elsevier
Proteomics plays a vital role in biomedical research in the post-genomic era. With the
technological revolution and emerging computational and statistic models, proteomic …

TREM2 receptor protects against complement-mediated synaptic loss by binding to complement C1q during neurodegeneration

L Zhong, X Sheng, W Wang, Y Li, R Zhuo, K Wang… - Immunity, 2023 - cell.com
Triggering receptor expressed on myeloid cells 2 (TREM2) is strongly linked to Alzheimer's
disease (AD) risk, but its functions are not fully understood. Here, we found that TREM2 …

Deciphering molecular interactions by proximity labeling

W Qin, KF Cho, PE Cavanagh, AY Ting - Nature methods, 2021 - nature.com
Many biological processes are executed and regulated through the molecular interactions of
proteins and nucleic acids. Proximity labeling (PL) is a technology for tagging the …

NULISA: a proteomic liquid biopsy platform with attomolar sensitivity and high multiplexing

W Feng, JC Beer, Q Hao, IS Ariyapala… - Nature …, 2023 - nature.com
The blood proteome holds great promise for precision medicine but poses substantial
challenges due to the low abundance of most plasma proteins and the vast dynamic range …

Multi-omics approaches for biomarker discovery in early ovarian cancer diagnosis

Y **ao, M Bi, H Guo, M Li - EBioMedicine, 2022 - thelancet.com
Ovarian cancer (OC) is a heterogeneous disease with the highest mortality rate and the
poorest prognosis among gynecological malignancies. Because of the absence of specific …

Learning without neurons in physical systems

M Stern, A Murugan - Annual Review of Condensed Matter …, 2023 - annualreviews.org
Learning is traditionally studied in biological or computational systems. The power of
learning frameworks in solving hard inverse problems provides an appealing case for the …

Single-cell proteomics

LF Vistain, S Tay - Trends in biochemical sciences, 2021 - cell.com
The inability to make broad, minimally biased measurements of a cell's proteome stands as
a major bottleneck for understanding how gene expression translates into cellular …

LC3B is an RNA-binding protein to trigger rapid mRNA degradation during autophagy

HJ Hwang, H Ha, BS Lee, BH Kim, HK Song… - Nature …, 2022 - nature.com
LC3/ATG8 has long been appreciated to play a central role in autophagy, by which a variety
of cytoplasmic materials are delivered to lysosomes and eventually degraded. However …

CRISPR/cas systems redefine nucleic acid detection: principles and methods

M Wang, R Zhang, J Li - Biosensors and Bioelectronics, 2020 - Elsevier
Methods that enable rapid, sensitive and specific analyses of nucleic acid sequences have
positive effects on precise disease diagnostics and effective clinical treatments by providing …