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Extraction, purification, structural characterization, and gut microbiota relationship of polysaccharides: A review
Intestinal dysbiosis is one of the major causes of the occurrence of metabolic syndromes,
such as obesity, diabetes, nonalcoholic fatty liver disease, and cardiovascular diseases …
such as obesity, diabetes, nonalcoholic fatty liver disease, and cardiovascular diseases …
dbCAN3: automated carbohydrate-active enzyme and substrate annotation
Carbohydrate active enzymes (CAZymes) are made by various organisms for complex
carbohydrate metabolism. Genome mining of CAZymes has become a routine data analysis …
carbohydrate metabolism. Genome mining of CAZymes has become a routine data analysis …
Taxonomic and carbon metabolic diversification of Bathyarchaeia during its coevolution history with early Earth surface environment
Bathyarchaeia, as one of the most abundant microorganisms on Earth, play vital roles in the
global carbon cycle. However, our understanding of their origin, evolution, and ecological …
global carbon cycle. However, our understanding of their origin, evolution, and ecological …
dbCAN-seq update: CAZyme gene clusters and substrates in microbiomes
C arbohydrate A ctive En Zymes (CAZymes) are significantly important for microbial
communities to thrive in carbohydrate rich environments such as animal guts, agricultural …
communities to thrive in carbohydrate rich environments such as animal guts, agricultural …
[HTML][HTML] The landscape and perspectives of the human gut metaproteomics
The human gut microbiome is closely associated with human health and diseases.
Metaproteomics has emerged as a valuable tool for studying the functionality of the gut …
Metaproteomics has emerged as a valuable tool for studying the functionality of the gut …
Conserved unique peptide patterns (CUPP) online platform: peptide-based functional annotation of carbohydrate active enzymes
The CUPP platform includes a web server for functional annotation and sub-grou** of
carbohydrate active enzymes (CAZymes) based on a novel peptide-based similarity …
carbohydrate active enzymes (CAZymes) based on a novel peptide-based similarity …
Structural basis of the strict specificity of a bacterial GH31 α-1, 3-glucosidase for nigerooligosaccharides
M Ikegaya, T Moriya, N Adachi, M Kawasaki… - Journal of Biological …, 2022 - Elsevier
Carbohydrate-active enzymes are involved in the degradation, biosynthesis, and
modification of carbohydrates and vary with the diversity of carbohydrates. The glycoside …
modification of carbohydrates and vary with the diversity of carbohydrates. The glycoside …
Multiple profile models extract features from protein sequence data and resolve functional diversity of very different protein families
Functional classification of proteins from sequences alone has become a critical bottleneck
in understanding the myriad of protein sequences that accumulate in our databases. The …
in understanding the myriad of protein sequences that accumulate in our databases. The …
Integrated omic profiling of the medicinal mushroom Inonotus obliquus under submerged conditions
J Hao, X Wang, Y Shi, L Li, J Chu, J Li, W Lin, T Yu… - BMC genomics, 2023 - Springer
Abstract Background The Inonotus obliquus mushroom, a wondrous fungus boasting edible
and medicinal qualities, has been widely used as a folk medicine and shown to have many …
and medicinal qualities, has been widely used as a folk medicine and shown to have many …
Cover crop** reduces the negative effect of salinity on soil microbiomes
D Dasgupta, M Ries, K Walter… - Journal of …, 2023 - Wiley Online Library
Introduction Soil salinization is a major abiotic stress that imposes high osmotic stress on
plant growth, thereby limiting crop productivity. It also acts as an environmental filter for …
plant growth, thereby limiting crop productivity. It also acts as an environmental filter for …