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The minimum information about a proteomics experiment (MIAPE)
Both the generation and the analysis of proteomics data are now widespread, and high-
throughput approaches are commonplace. Protocols continue to increase in complexity as …
throughput approaches are commonplace. Protocols continue to increase in complexity as …
Genomic fluidity and pathogenic bacteria: applications in diagnostics, epidemiology and intervention
The increasing availability of DNA-sequence information for multiple pathogenic and non-
pathogenic variants of individual bacterial species has indicated that both DNA acquisition …
pathogenic variants of individual bacterial species has indicated that both DNA acquisition …
IMEx: imperfect microsatellite extractor
Motivation: Microsatellites, also known as simple sequence repeats, are the tandem repeats
of nucleotide motifs of the size 1–6 bp found in every genome known so far. Their …
of nucleotide motifs of the size 1–6 bp found in every genome known so far. Their …
Whole genome identification of Mycobacterium tuberculosisvaccine candidates by comprehensive data mining and bioinformatic analyses
A Zvi, N Ariel, J Fulkerson, JC Sadoff… - BMC medical …, 2008 - Springer
Background Mycobacterium tuberculosis, the causative agent of tuberculosis (TB), infects~ 8
million annually culminating in~ 2 million deaths. Moreover, about one third of the …
million annually culminating in~ 2 million deaths. Moreover, about one third of the …
Whole genome sequence analysis of Mycobacterium bovis bacillus Calmette–Guérin (BCG) Tokyo 172: a comparative study of BCG vaccine substrains
M Seki, I Honda, I Fujita, I Yano, S Yamamoto… - Vaccine, 2009 - Elsevier
To investigate the molecular characteristics of bacillus Calmette–Guérin (BCG) vaccines, the
complete genomic sequence of Mycobacterium bovis BCG Tokyo 172 was determined, and …
complete genomic sequence of Mycobacterium bovis BCG Tokyo 172 was determined, and …
Inducible Nitric Oxide Synthase (iNOS) Gene Polymorphism and Disease Prevalence
Nitric oxide synthase gene is present on chromosome 17 and has been implicated in a wide
variety of diseases. The nitric oxide synthase enzyme forms nitric oxide that besides being a …
variety of diseases. The nitric oxide synthase enzyme forms nitric oxide that besides being a …
Analysis of the genetic variation in Mycobacterium tuberculosis strains by multiple genome alignments
Background The recent determination of the complete nucleotide sequence of several
Mycobacterium tuberculosis (MTB) genomes allows the use of comparative genomics as a …
Mycobacterium tuberculosis (MTB) genomes allows the use of comparative genomics as a …
Insights into genome plasticity and gene regulation in Orientia tsutsugamushi through genome-wide mining of microsatellite markers
Microsatellite markers are being used for molecular identification and characterization as
well as estimation of evolution patterns due to their highly polymorphic nature. The repeats …
well as estimation of evolution patterns due to their highly polymorphic nature. The repeats …
Simple sequence repeats in mycobacterial genomes
Simple sequence repeats (SSRs) or microsatellites are the repetitive nucleotide sequences
of motifs of length 1–6 bp. They are scattered throughout the genomes of all the known …
of motifs of length 1–6 bp. They are scattered throughout the genomes of all the known …
[HTML][HTML] Label-Free Comparative Proteomics of Differentially Expressed Mycobacterium tuberculosis Protein in Rifampicin-Related Drug-Resistant Strains
N Ullah, L Hao, JL Banga Ndzouboukou, S Chen, Y Wu… - Pathogens, 2021 - mdpi.com
Rifampicin (RIF) is one of the most important first-line anti-tuberculosis (TB) drugs, and more
than 90% of RIF-resistant (RR) Mycobacterium tuberculosis clinical isolates belong to …
than 90% of RIF-resistant (RR) Mycobacterium tuberculosis clinical isolates belong to …