DNA metabarcoding in diet studies: Unveiling ecological aspects in aquatic and terrestrial ecosystems

LL de Sousa, SM Silva, R Xavier - Environmental DNA, 2019 - Wiley Online Library
Effective conservation of species and ecosystems requires the understanding of important
ecological traits, such as dietary habits, food webs, and trophic niches. In diet studies, the …

Overcoming the pitfalls of merging dietary metabarcoding into ecological networks

JP Cuff, FM Windsor, MPTG Tercel… - Methods in Ecology …, 2022 - Wiley Online Library
The construction of increasingly detailed species interaction networks is extending the
potential applications of network ecology, providing an opportunity to understand complex …

What goes in, must come out: Combining scat‐based molecular diet analysis and quantification of ingested microplastics in a marine top predator

SE Nelms, HE Parry, KA Bennett… - Methods in Ecology …, 2019 - Wiley Online Library
Microplastics (plastic particles< 5 mm in size) are highly available for ingestion by a wide
range of organisms, either through direct consumption or indirectly, via trophic transfer, from …

The predator problem and PCR primers in molecular dietary analysis: swamped or silenced; depth or breadth?

JP Cuff, JJN Kitson… - Molecular Ecology …, 2023 - Wiley Online Library
Dietary metabarcoding has vastly improved our ability to analyse the diets of animals, but it
is hampered by a plethora of technical limitations including potentially reduced data output …

Deciphering Eurasian otter (Lutra lutra L.) and seal (Phoca vitulina L.; Halichoerus grypus F.) diet: Metabarcoding tailored for fresh and saltwater fish species

JO Boyi, E Heße, S Rohner, J Säurich… - Molecular …, 2022 - Wiley Online Library
Long‐lived top predators shape biodiversity structure in their ecosystems and predator–prey
interactions are critical in decoding how communities function. Studies on the foraging …

Elucidating shark diets with DNA metabarcoding from cloacal swabs

MPM van Zinnicq Bergmann… - Molecular Ecology …, 2021 - Wiley Online Library
Animal dietary information provides the foundation for understanding trophic relationships,
which is essential for ecosystem management. Yet, in marine systems, high‐resolution diet …

Fine‐scale diversity of prey detected in humpback whale feces

RD Reidy, MA Lemay, KG Innes… - Ecology and …, 2022 - Wiley Online Library
Predator diets are largely influenced by prey availability and abundance. Yet, in
heterogenous marine environments, identifying the prey species consumed by diving …

Combining stable isotopes, morphological, and molecular analyses to reconstruct the diet of free‐ranging consumers

M Bonin, C Dussault, J Taillon, N Lecomte… - Ecology and …, 2020 - Wiley Online Library
Accurate estimates of animal diet composition are essential to untangle complex interactions
in food webs. Biomarkers and molecular tools are increasingly used to estimate diet …

Large‐scale molecular diet analysis in a generalist marine mammal reveals male preference for prey of conservation concern

D Schwarz, SM Spitzer, AC Thomas… - Ecology and …, 2018 - Wiley Online Library
Sex‐specific diet information is important in the determination of predator impacts on prey
populations. Unfortunately, the diet of males and females can be difficult to describe …

Finding mesopelagic prey in a changing Southern Ocean

CR McMahon, MA Hindell, JB Charrassin, S Corney… - Scientific Reports, 2019 - nature.com
Mesopelagic fish and squid occupy ocean depths extending below the photic zone and their
vertical migrations represent a massive pathway moving energy and carbon through the …