Cellular incorporation of unnatural amino acids and bioorthogonal labeling of proteins

K Lang, JW Chin - Chemical reviews, 2014 - ACS Publications
In the past 15 years, there have been rapid developments in the ability to cotranslationally
incorporate unnatural amino acids into proteins produced in cells, both at defined sites via …

Extracellular matrix dynamics: tracking in biological systems and their implications

M Hu, Z Ling, X Ren - Journal of Biological Engineering, 2022 - Springer
The extracellular matrix (ECM) constitutes the main acellular microenvironment of cells in
almost all tissues and organs. The ECM not only provides mechanical support, but also …

Designing logical codon reassignment–Expanding the chemistry in biology

A Dumas, L Lercher, CD Spicer, BG Davis - Chemical science, 2015 - pubs.rsc.org
Over the last decade, the ability to genetically encode unnatural amino acids (UAAs) has
evolved rapidly. The programmed incorporation of UAAs into recombinant proteins relies on …

[HTML][HTML] The science of puromycin: From studies of ribosome function to applications in biotechnology

R Aviner - Computational and Structural Biotechnology Journal, 2020 - Elsevier
Puromycin is a naturally occurring aminonucleoside antibiotic that inhibits protein synthesis
by ribosome-catalyzed incorporation into the C-terminus of elongating nascent chains …

Kinetic analysis of protein stability reveals age-dependent degradation

E McShane, C Sin, H Zauber, JN Wells, N Donnelly… - Cell, 2016 - cell.com
Do young and old protein molecules have the same probability to be degraded? We
addressed this question using metabolic pulse-chase labeling and quantitative mass …

Selective chemical protein modification

CD Spicer, BG Davis - Nature communications, 2014 - nature.com
Chemical modification of proteins is an important tool for probing natural systems, creating
therapeutic conjugates and generating novel protein constructs. Site-selective reactions …

Proteome turnover in the spotlight: approaches, applications, and perspectives

AB Ross, JD Langer, M Jovanovic - Molecular & Cellular Proteomics, 2021 - ASBMB
In all cells, proteins are continuously synthesized and degraded to maintain protein
homeostasis and modify gene expression levels in response to stimuli. Collectively, the …

BDNF mechanisms in late LTP formation: a synthesis and breakdown

D Panja, CR Bramham - Neuropharmacology, 2014 - Elsevier
Unraveling the molecular mechanisms governing long-term synaptic plasticity is a key to
understanding how the brain stores information in neural circuits and adapts to a changing …

Chemical reporters for biological discovery

M Grammel, HC Hang - Nature chemical biology, 2013 - nature.com
Functional tools are needed to understand complex biological systems. Here we review how
chemical reporters in conjunction with bioorthogonal labeling methods can be used to …

In situ visualization of newly synthesized proteins in environmental microbes using amino acid tagging and click chemistry

R Hatzenpichler, S Scheller… - Environmental …, 2014 - Wiley Online Library
Here we describe the application of a new click chemistry method for fluorescent tracking of
protein synthesis in individual microorganisms within environmental samples. This …