mRNA regulation by RNA modifications

WV Gilbert, S Nachtergaele - Annual Review of Biochemistry, 2023 - annualreviews.org
Chemical modifications on mRNA represent a critical layer of gene expression regulation.
Research in this area has continued to accelerate over the last decade, as more …

Dynamic transcriptomic m5C and its regulatory role in RNA processing

YS Chen, WL Yang, YL Zhao… - Wiley Interdisciplinary …, 2021 - Wiley Online Library
Abstract RNA 5‐methylcytosine (m5C) is a prevalent RNA modification in multiple RNA
species, including messenger RNAs (mRNAs), transfer RNAs (tRNAs), ribosomal RNAs …

Deciphering epitranscriptome: modification of mRNA bases provides a new perspective for post-transcriptional regulation of gene expression

S Kumar, T Mohapatra - Frontiers in cell and developmental biology, 2021 - frontiersin.org
Gene regulation depends on dynamic and reversibly modifiable biological and chemical
information in the epigenome/epitranscriptome. Accumulating evidence suggests that …

New twists in detecting mRNA modification dynamics

I Anreiter, Q Mir, JT Simpson, SC Janga, M Soller - Trends in Biotechnology, 2021 - cell.com
Modified nucleotides in mRNA are an essential addition to the standard genetic code of four
nucleotides in animals, plants, and their viruses. The emerging field of epitranscriptomics …

m5C-Atlas: a comprehensive database for decoding and annotating the 5-methylcytosine (m5C) epitranscriptome

J Ma, B Song, Z Wei, D Huang, Y Zhang… - Nucleic Acids …, 2022 - academic.oup.com
Methylcytosine (m5C) is one of the most prevalent covalent modifications on RNA. It is
known to regulate a broad variety of RNA functions, including nuclear export, RNA stability …

Phloem iron remodels root development in response to ammonium as the major nitrogen source

XX Liu, HH Zhang, QY Zhu, JY Ye, YX Zhu… - Nature …, 2022 - nature.com
Plants use nitrate and ammonium as major nitrogen (N) sources, each affecting root
development through different mechanisms. However, the exact signaling pathways …

[HTML][HTML] Epigenetic modifications of mRNA and DNA in plants

Z Liang, A Riaz, S Chachar, Y Ding, H Du, X Gu - Molecular Plant, 2020 - cell.com
Advances in the detection and map** of messenger RNA (mRNA) N 6-methyladenosine
(m 6 A) and 5-methylcytosine (m 5 C), and DNA N 6-methyldeoxyadenosine (6mA) …

RNA methylation in plants: An overview

H Shinde, A Dudhate, US Kadam… - Frontiers in Plant Science, 2023 - frontiersin.org
RNA methylation is an important post-transcriptional modification that influences gene
regulation. Over 200 different types of RNA modifications have been identified in plants. In …

Recent advances in the plant epitranscriptome

L Shen, J Ma, P Li, Y Wu, H Yu - Genome Biology, 2023 - Springer
Chemical modifications of RNAs, known as the epitranscriptome, are emerging as
widespread regulatory mechanisms underlying gene regulation. The field of …

Plasmodesmata: Channels Under Pressure

EM Bayer, Y Benitez-Alfonso - Annual review of plant biology, 2024 - annualreviews.org
Multicellularity has emerged multiple times in evolution, enabling groups of cells to share a
living space and reducing the burden of solitary tasks. While unicellular organisms exhibit …