Analysis of plant diversity with retrotransposon-based molecular markers

R Kalendar, AJ Flavell, THN Ellis, T Sjakste, C Moisy… - Heredity, 2011‏ - nature.com
Retrotransposons are both major generators of genetic diversity and tools for detecting the
genomic changes associated with their activity because they create large and stable …

Use of retrotransposon-derived genetic markers to analyse genomic variability in plants

R Kalendar, A Amenov, A Daniyarov - Functional Plant Biology, 2018‏ - CSIRO Publishing
Transposable elements (TEs) are common mobile genetic elements comprising several
classes and making up the majority of eukaryotic genomes. The movement and …

iPBS: a universal method for DNA fingerprinting and retrotransposon isolation

R Kalendar, K Antonius, P Smýkal… - Theoretical and Applied …, 2010‏ - Springer
Molecular markers are essential in plant and animal breeding and biodiversity applications,
in human forensics, and for map-based cloning of genes. The long terminal repeat (LTR) …

[کتاب][B] Introduction to plant biotechnology (3/e)

HS Chawla - 2011‏ - taylorfrancis.com
This book has been written to meet the needs of students for biotechnology courses at
various levels of undergraduate and graduate studies. This book covers all the important …

IRAP and REMAP for retrotransposon-based genoty** and fingerprinting

R Kalendar, AH Schulman - Nature protocols, 2006‏ - nature.com
Retrotransposons can be used as markers because their integration creates new joints
between genomic DNA and their conserved ends. To detect polymorphisms for …

Comparative analyses of genetic diversities within tomato and pepper collections detected by retrotransposon-based SSAP, AFLP and SSR

SM Tam, C Mhiri, A Vogelaar, M Kerkveld… - Theoretical and Applied …, 2005‏ - Springer
The retrotransposon-based sequence-specific amplification polymorphism (SSAP) marker
system was used to assess the genetic diversities of collections of tomato and pepper …

Transposon-based tagging: IRAP, REMAP, and iPBS

R Kalendar, AH Schulman - Molecular plant taxonomy: methods and …, 2014‏ - Springer
Retrotransposons are a major component of virtually all eukaryotic genomes, which makes
them useful as molecular markers. Various molecular marker systems have been developed …

Non-coding nuclear DNA markers in phylogenetic reconstruction

M Calonje, S Martín-Bravo, C Dobeš, W Gong… - Plant Systematics and …, 2009‏ - Springer
Molecular DNA based data sets are the most important resource for phylogenetic
reconstruction. Among the various marker systems, which were introduced and optimized …

The role of LTR retrotransposons in plant genetic engineering: how to control their transposition in the genome

M Ramakrishnan, PK Papolu, S Mullasseri, M Zhou… - Plant Cell Reports, 2023‏ - Springer
Key message We briefly discuss that the similarity of LTR retrotransposons to retroviruses is
a great opportunity for the development of a genetic engineering tool that exploits intragenic …

Genetic and epigenetic instabilities induced by tissue culture in wild barley (Hordeum brevisubulatum (Trin.) Link)

X Li, X Yu, N Wang, Q Feng, Z Dong, L Liu… - Plant Cell, Tissue and …, 2007‏ - Springer
A simple tissue culture protocol was developed for efficient plant regeneration from young
inflorescence-derived calli in wild barley, Hordeum brevisubulatum (Trin.) Link, an important …