INVITED REVIEW: Molecular analysis of predation: a review of best practice for DNA‐based approaches

RA King, DS Read, M Traugott… - Molecular …, 2008 - Wiley Online Library
Molecular analysis of predation, through polymerase chain reaction amplification of prey
remains within the faeces or digestive systems of predators, is a rapidly growing field …

Ancient rapid radiations of insects: challenges for phylogenetic analysis

JB Whitfield, KM Kjer - Annu. Rev. Entomol., 2008 - annualreviews.org
Phylogenies of major groups of insects based on both morphological and molecular data
have sometimes been contentious, often lacking the data to distinguish between alternative …

PartitionFinder: combined selection of partitioning schemes and substitution models for phylogenetic analyses

R Lanfear, B Calcott, SYW Ho… - Molecular biology and …, 2012 - academic.oup.com
In phylogenetic analyses of molecular sequence data, partitioning involves estimating
independent models of molecular evolution for different sets of sites in a sequence …

How to sequence and annotate insect mitochondrial genomes for systematic and comparative genomics research

S Cameron - Systematic Entomology, 2014 - eprints.qut.edu.au
Over the past decade the mitochondrial (mt) genome has become the most widely used
genomic resource available for systematic entomology. While the availability of other types …

The influence of rate heterogeneity among sites on the time dependence of molecular rates

J Soubrier, M Steel, MSY Lee… - Molecular biology …, 2012 - academic.oup.com
Molecular evolutionary rate estimates have been shown to depend on the time period over
which they are estimated. Factors such as demographic processes, calibration errors …

Mitochondrial phylogenomics illuminates the evolutionary history of Neuropterida

Y Wang, X Liu, IJ Garzón‐Orduña, SL Winterton… - …, 2017 - Wiley Online Library
Neuroptera (lacewings) and allied orders Megaloptera (dobsonflies, alderflies) and
Raphidioptera (snakeflies) are predatory insects and together make up the clade …

Enhanced primers for amplification of DNA barcodes from a broad range of marine metazoans

J Lobo, PM Costa, MAL Teixeira, MSG Ferreira… - BMC ecology, 2013 - Springer
Background Building reference libraries of DNA barcodes is relatively straightforward when
specifically designed primers are available to amplify the COI-5P region from a relatively …

The complete mitochondrial genome of the tobacco hornworm, Manduca sexta,(Insecta: Lepidoptera: Sphingidae), and an examination of mitochondrial gene …

SL Cameron, MF Whiting - Gene, 2008 - Elsevier
The entire mitochondrial genome of the tobacco hornworm, Manduca sexta (Lepidoptera:
S**hidae) was sequenced—a circular molecular 15516 bp in size. The arrangement of …

An integrated phylogenetic reassessment of the parasitoid superfamily Platygastroidea (Hymenoptera: Proctotrupomorpha) results in a revised familial classification

H Chen, Z Lahey, EJ Talamas, AA Valerio… - Systematic …, 2021 - Wiley Online Library
Abstract The superfamily Platygastroidea (Hymenoptera: Proctotrupomorpha) is a diverse
group of parasitoid wasps that are parasitoids of nine orders of insects as well as spiders …

Reconstructing Mammalian Phylogenies: A Detailed Comparison of the Cytochrome b and Cytochrome Oxidase Subunit I Mitochondrial Genes

SS Tobe, AC Kitchener, AMT Linacre - PloS one, 2010 - journals.plos.org
The phylogeny and taxonomy of mammalian species were originally based upon shared or
derived morphological characteristics. However, genetic analyses have more recently …