Genomic analyses of nitrogen utilization efficiency, its indicator trait blood urea nitrogen and the relationship to classical growth performance and feed efficiency traits …

M Schmid, R Weishaar, J Seifert… - Journal of Animal …, 2024 - Wiley Online Library
Improving the nutrient efficiency in pork production is required to reduce the resource
competition between human food and animal feed regarding diet components edible for …

Plant breeding simulations with AlphaSimR

J Bančič, P Greenspoon, RC Gaynor… - Crop Science, 2025 - Wiley Online Library
Plant breeding plays a crucial role in the development of high‐performing crop varieties that
meet the demands of society. Emerging breeding techniques offer the potential to improve …

Optimization of breeding program design through stochastic simulation with evolutionary algorithms

A Hassanpour, J Geibel, H Simianer… - G3: Genes …, 2025 - academic.oup.com
The effective planning and allocation of resources in modern breeding programs is a
complex task. Breeding program design and operational management have a major impact …

[HTML][HTML] Genome-Wide Association Study Meta-Analysis Elucidates Genetic Structure and Identifies Candidate Genes of Teat Number Traits in Pigs

T Li, P Wan, Q Lin, C Wei, K Guo, X Li, Y Lu… - International Journal of …, 2023 - mdpi.com
The teat number is a pivotal reproductive trait that significantly influences the survival rate of
piglets. A meta-analysis is a robust instrument, enhancing the universality of research …

How economic weights translate into genetic and phenotypic progress, and vice versa

H Simianer, J Heise, S Rensing, T Pook… - Genetics Selection …, 2023 - Springer
Background This paper highlights the relationships between economic weights, genetic
progress, and phenotypic progress in genomic breeding programs that aim at generating …

Optimization of breeding program design through stochastic simulation with kernel regression

A Hassanpour, J Geibel, H Simianer… - G3: Genes, Genomes …, 2023 - academic.oup.com
In recent years, breeding programs have increased significantly in size and complexity, with
various highly interdependent parameters and many contrasting breeding goals. As a result …

The Modular Breeding Program Simulator (MoBPS) allows efficient simulation of complex breeding programs

T Pook, C Reimer, A Freudenberg… - Animal Production …, 2021 - CSIRO Publishing
Context Breeding programs aim at improving the genetic characteristics of livestock
populations with respect to productivity, fitness and adaptation, while controlling negative …

PyBrOpS: a Python package for breeding program simulation and optimization for multi-objective breeding

RZ Shrote, AM Thompson - G3: Genes, Genomes, Genetics, 2024 - academic.oup.com
Plant breeding is a complex endeavor that is almost always multi-objective in nature. In
recent years, stochastic breeding simulations have been used by breeders to assess the …

GOplan: an R package for animal breeding program design via integrating Gene Flow and Bayesian optimization methods

Q Huang, L Zhou, Y Xue, H Du, Y Zhuo… - G3: Genes …, 2025 - academic.oup.com
The design of breeding programs is crucial for maximizing economic gains. Simulation
provides the most efficient measures to test these programs, as real-world trials are often …

Effects of selection for litter size variability on ovarian folliculogenesis, ovarian cell proliferation, apoptosis, and production of regulatory peptides in rabbits

I Hadjadj, Z Fabová, ML García, B Loncová… - Italian Journal of …, 2024 - Taylor & Francis
The present study aimed to identify the novel mechanisms regulating rabbit fecundity. For
this purpose, the association between litter size variability, fecundity, ovarian morphology …