Microbial surface colonization and biofilm development in marine environments

H Dang, CR Lovell - Microbiology and molecular biology reviews, 2016 - Am Soc Microbiol
Biotic and abiotic surfaces in marine waters are rapidly colonized by microorganisms.
Surface colonization and subsequent biofilm formation and development provide numerous …

Molecular mechanisms of two-component signal transduction

CP Zschiedrich, V Keidel, H Szurmant - Journal of molecular biology, 2016 - Elsevier
Two-component systems (TCS) comprising sensor histidine kinases and response regulator
proteins are among the most important players in bacterial and archaeal signal transduction …

MiST 4.0: a new release of the microbial signal transduction database, now with a metagenomic component

VM Gumerov, LE Ulrich, IB Zhulin - Nucleic Acids Research, 2024 - academic.oup.com
Signal transduction systems in bacteria and archaea link environmental stimuli to specific
adaptive cellular responses. They control gene expression, motility, biofilm formation …

Direct-coupling analysis of residue coevolution captures native contacts across many protein families

F Morcos, A Pagnani, B Lunt… - Proceedings of the …, 2011 - National Acad Sciences
The similarity in the three-dimensional structures of homologous proteins imposes strong
constraints on their sequence variability. It has long been suggested that the resulting …

Bacterial sigma factors: a historical, structural, and genomic perspective

A Feklístov, BD Sharon, SA Darst… - Annual review of …, 2014 - annualreviews.org
Transcription initiation is the crucial focal point of gene expression in prokaryotes. The key
players in this process, sigma factors (σs), associate with the catalytic core RNA polymerase …

Evolution of two-component signal transduction systems

EJ Capra, MT Laub - Annual review of microbiology, 2012 - annualreviews.org
To exist in a wide range of environmental niches, bacteria must sense and respond to a
variety of external signals. A primary means by which this occurs is through two-component …

The effect of bacterial chemotaxis on host infection and pathogenicity

MA Matilla, T Krell - FEMS Microbiology Reviews, 2018 - academic.oup.com
Chemotaxis enables microorganisms to move according to chemical gradients. Although
this process requires substantial cellular energy, it also affords key physiological benefits …

The cognitive cell: bacterial behavior reconsidered

P Lyon - Frontiers in microbiology, 2015 - frontiersin.org
Research on how bacteria adapt to changing environments underlies the contemporary
biological understanding of signal transduction (ST), and ST provides the foundation of the …

MiST 3.0: an updated microbial signal transduction database with an emphasis on chemosensory systems

VM Gumerov, DR Ortega, O Adebali… - Nucleic acids …, 2020 - academic.oup.com
Bacteria and archaea employ dedicated signal transduction systems that modulate gene
expression, second-messenger turnover, quorum sensing, biofilm formation, motility, host …

De novo design of an intercellular signaling toolbox for multi-channel cell–cell communication and biological computation

P Du, H Zhao, H Zhang, R Wang, J Huang… - Nature …, 2020 - nature.com
Intercellular signaling is indispensable for single cells to form complex biological structures,
such as biofilms, tissues and organs. The genetic tools available for engineering …