Fungal identification using molecular tools: a primer for the natural products research community

HA Raja, AN Miller, CJ Pearce… - Journal of natural …, 2017 - ACS Publications
Fungi are morphologically, ecologically, metabolically, and phylogenetically diverse. They
are known to produce numerous bioactive molecules, which makes them very useful for …

Genetic diversity and conservation units: dealing with the species-population continuum in the age of genomics

DJ Coates, M Byrne, C Moritz - Frontiers in Ecology and Evolution, 2018 - frontiersin.org
Current approaches to biodiversity conservation are largely based on geographic areas,
ecosystems, ecological communities, and species, with less attention on genetic diversity …

ONTbarcoder and MinION barcodes aid biodiversity discovery and identification by everyone, for everyone

A Srivathsan, L Lee, K Katoh, E Hartop, SN Kutty… - BMC biology, 2021 - Springer
Background DNA barcodes are a useful tool for discovering, understanding, and monitoring
biodiversity which are critical tasks at a time of rapid biodiversity loss. However, widespread …

Multi-rate Poisson tree processes for single-locus species delimitation under maximum likelihood and Markov chain Monte Carlo

P Kapli, S Lutteropp, J Zhang, K Kobert… - …, 2017 - academic.oup.com
Motivation In recent years, molecular species delimitation has become a routine approach
for quantifying and classifying biodiversity. Barcoding methods are of particular importance …

Comparison of methods for molecular species delimitation across a range of speciation scenarios

A Luo, C Ling, SYW Ho, CD Zhu - Systematic Biology, 2018 - academic.oup.com
Species are fundamental units in biological research and can be defined on the basis of
various operational criteria. There has been growing use of molecular approaches for …

Identification and nomenclature of the genus Penicillium

CM Visagie, J Houbraken, JC Frisvad… - Studies in …, 2014 - ingentaconnect.com
Penicillium is a diverse genus occurring worldwide and its species play important roles as
decomposers of organic materials and cause destructive rots in the food industry where they …

Estimating global biodiversity: the role of cryptic insect species

X Li, JJ Wiens - Systematic Biology, 2023 - academic.oup.com
How many species are there on Earth and to what groups do these species belong? These
fundamental questions span systematics, ecology, and evolutionary biology. Yet, recent …

One fungus, which genes? Development and assessment of universal primers for potential secondary fungal DNA barcodes

JB Stielow, CA Levesque, KA Seifert… - … and Evolution of …, 2015 - ingentaconnect.com
The aim of this study was to assess potential candidate gene regions and corresponding
universal primer pairs as secondary DNA barcodes for the fungal kingdom, additional to ITS …

[KNIHA][B] Species concepts in biology

FE Zachos - 2016 - Springer
The species problem has triggered the publication of an almost infinite number of theoretical
and practical studies, including quite a number of books. I should, therefore, perhaps briefly …

The silent extinction of species and taxonomists—An appeal to science policymakers and legislators

I Löbl, B Klausnitzer, M Hartmann, FT Krell - Diversity, 2023 - mdpi.com
The science of taxonomy, albeit being fundamental for all organismic research, has been
underfunded and undervalued for about two generations. We analyze how this could …