The topology toolkit

J Tierny, G Favelier, JA Levine… - IEEE transactions on …, 2017 - ieeexplore.ieee.org
This system paper presents the Topology ToolKit (TTK), a software platform designed for the
topological analysis of scalar data in scientific visualization. While topological data analysis …

A survey of topology‐based methods in visualization

C Heine, H Leitte, M Hlawitschka… - Computer Graphics …, 2016 - Wiley Online Library
This paper presents the state of the art in the area of topology‐based visualization. It
describes the process and results of an extensive annotation for generating a definition and …

TopoMS: Comprehensive topological exploration for molecular and condensed‐matter systems

H Bhatia, AG Gyulassy, V Lordi, JE Pask… - Journal of …, 2018 - Wiley Online Library
We introduce TopoMS, a computational tool enabling detailed topological analysis of
molecular and condensed‐matter systems, including the computation of atomic volumes and …

Morse complexes for shape segmentation and homological analysis: discrete models and algorithms

L De Floriani, U Fugacci, F Iuricich… - Computer graphics …, 2015 - Wiley Online Library
Morse theory offers a natural and mathematically‐sound tool for shape analysis and
understanding. It allows studying the behavior of a scalar function defined on a manifold …

Discrete morse sandwich: Fast computation of persistence diagrams for scalar data–an algorithm and a benchmark

P Guillou, J Vidal, J Tierny - IEEE Transactions on Visualization …, 2023 - ieeexplore.ieee.org
This paper introduces an efficient algorithm for persistence diagram computation, given an
input piecewise linear scalar field defined on a-dimensional simplicial complex, with. Our …

Progressive wasserstein barycenters of persistence diagrams

J Vidal, J Budin, J Tierny - IEEE transactions on visualization …, 2019 - ieeexplore.ieee.org
This paper presents an efficient algorithm for the progressive approximation of Wasserstein
barycenters of persistence diagrams, with applications to the visual analysis of ensemble …

Lifted Wasserstein matcher for fast and robust topology tracking

M Soler, M Plainchault, B Conche… - 2018 IEEE 8th …, 2018 - ieeexplore.ieee.org
This paper presents a robust and efficient method for tracking topological features in time-
varying scalar data. Structures are tracked based on the optimal matching between …

[КНИГА][B] Topological data analysis for scientific visualization

J Tierny - 2017 - Springer
This book is adapted from my habilitation thesis manuscript, which reviewed my research
work since my Ph. D. thesis defense (2008), as a postdoctoral researcher at the University of …

Topologically controlled lossy compression

M Soler, M Plainchault, B Conche… - 2018 IEEE Pacific …, 2018 - ieeexplore.ieee.org
This paper presents a new algorithm for the lossy compression of scalar data defined on 2D
or 3D regular grids, with topological control. Certain techniques allow users to control the …

Task-based augmented contour trees with fibonacci heaps

C Gueunet, P Fortin, J Jomier… - IEEE Transactions on …, 2019 - ieeexplore.ieee.org
This paper presents a new algorithm for the fast, shared memory, multi-core computation of
augmented contour trees on triangulations. In contrast to most existing parallel algorithms …