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SynthSeg: Segmentation of brain MRI scans of any contrast and resolution without retraining
Despite advances in data augmentation and transfer learning, convolutional neural
networks (CNNs) difficultly generalise to unseen domains. When segmenting brain scans …
networks (CNNs) difficultly generalise to unseen domains. When segmenting brain scans …
Robust machine learning segmentation for large-scale analysis of heterogeneous clinical brain MRI datasets
Every year, millions of brain MRI scans are acquired in hospitals, which is a figure
considerably larger than the size of any research dataset. Therefore, the ability to analyze …
considerably larger than the size of any research dataset. Therefore, the ability to analyze …
[HTML][HTML] Data synthesis and adversarial networks: A review and meta-analysis in cancer imaging
Despite technological and medical advances, the detection, interpretation, and treatment of
cancer based on imaging data continue to pose significant challenges. These include inter …
cancer based on imaging data continue to pose significant challenges. These include inter …
[HTML][HTML] TorchIO: a Python library for efficient loading, preprocessing, augmentation and patch-based sampling of medical images in deep learning
Background and ObjectiveProcessing of medical images such as MRI or CT presents
different challenges compared to RGB images typically used in computer vision. These …
different challenges compared to RGB images typically used in computer vision. These …
Challenges for machine learning in clinical translation of big data imaging studies
Combining deep learning image analysis methods and large-scale imaging datasets offers
many opportunities to neuroscience imaging and epidemiology. However, despite these …
many opportunities to neuroscience imaging and epidemiology. However, despite these …
Quantitative brain morphometry of portable low-field-strength MRI using super-resolution machine learning
Background Portable, low-field-strength (0.064-T) MRI has the potential to transform
neuroimaging but is limited by low spatial resolution and low signal-to-noise ratio. Purpose …
neuroimaging but is limited by low spatial resolution and low signal-to-noise ratio. Purpose …
[HTML][HTML] Joint super-resolution and synthesis of 1 mm isotropic MP-RAGE volumes from clinical MRI exams with scans of different orientation, resolution and contrast
Most existing algorithms for automatic 3D morphometry of human brain MRI scans are
designed for data with near-isotropic voxels at approximately 1 mm resolution, and …
designed for data with near-isotropic voxels at approximately 1 mm resolution, and …
FastSurferVINN: Building resolution-independence into deep learning segmentation methods—A solution for HighRes brain MRI
Leading neuroimaging studies have pushed 3T MRI acquisition resolutions below 1.0 mm
for improved structure definition and morphometry. Yet, only few, time-intensive automated …
for improved structure definition and morphometry. Yet, only few, time-intensive automated …
[HTML][HTML] Towards contrast-agnostic soft segmentation of the spinal cord
Spinal cord segmentation is clinically relevant and is notably used to compute spinal cord
cross-sectional area (CSA) for the diagnosis and monitoring of cord compression or …
cross-sectional area (CSA) for the diagnosis and monitoring of cord compression or …
[HTML][HTML] A web-based automated image processing research platform for cochlear implantation-related studies
The robust delineation of the cochlea and its inner structures combined with the detection of
the electrode of a cochlear implant within these structures is essential for envisaging a safer …
the electrode of a cochlear implant within these structures is essential for envisaging a safer …