Proteogenomic data and resources for pan-cancer analysis
Summary The National Cancer Institute's Clinical Proteomic Tumor Analysis Consortium
(CPTAC) investigates tumors from a proteogenomic perspective, creating rich multi-omics …
(CPTAC) investigates tumors from a proteogenomic perspective, creating rich multi-omics …
A post-genomic view of the ecophysiology, catabolism and biotechnological relevance of sulphate-reducing prokaryotes
R Rabus, SS Venceslau, L Wöhlbrand… - Advances in microbial …, 2015 - Elsevier
Dissimilatory sulphate reduction is the unifying and defining trait of sulphate-reducing
prokaryotes (SRP). In their predominant habitats, sulphate-rich marine sediments, SRP have …
prokaryotes (SRP). In their predominant habitats, sulphate-rich marine sediments, SRP have …
[HTML][HTML] A quantitative proteome map of the human body
Determining protein levels in each tissue and how they compare with RNA levels is
important for understanding human biology and disease as well as regulatory processes …
important for understanding human biology and disease as well as regulatory processes …
Transcriptional and translational differences of microglia from male and female brains
Sex differences in brain structure and function are of substantial scientific interest because of
sex-related susceptibility to psychiatric and neurological disorders. Neuroinflammation is a …
sex-related susceptibility to psychiatric and neurological disorders. Neuroinflammation is a …
Gene‐specific correlation of RNA and protein levels in human cells and tissues
An important issue for molecular biology is to establish whether transcript levels of a given
gene can be used as proxies for the corresponding protein levels. Here, we have developed …
gene can be used as proxies for the corresponding protein levels. Here, we have developed …
Nitric oxide-dependent anaerobic ammonium oxidation
Nitric oxide (NO) has important functions in biology and atmospheric chemistry as a toxin,
signaling molecule, ozone depleting agent and the precursor of the greenhouse gas nitrous …
signaling molecule, ozone depleting agent and the precursor of the greenhouse gas nitrous …
Microglial-derived miRNA let-7 and HMGB1 contribute to ethanol-induced neurotoxicity via TLR7
LG Coleman, J Zou, FT Crews - Journal of neuroinflammation, 2017 - Springer
Background Toll-like receptor (TLR) signaling is emerging as an important component of
neurodegeneration. TLR7 senses viral RNA and certain endogenous miRNAs to initiate …
neurodegeneration. TLR7 senses viral RNA and certain endogenous miRNAs to initiate …
Sodium butyrate abolishes lipopolysaccharide-induced depression-like behaviors and hippocampal microglial activation in mice
Y Yamawaki, N Yoshioka, K Nozaki, H Ito, K Oda… - Brain research, 2018 - Elsevier
Patients with major depressive disorder have elevated peripheral inflammation; the degree
of this increase correlates with the severity of the disorder. Chronic psychological stress …
of this increase correlates with the severity of the disorder. Chronic psychological stress …
Digital detection of proteins
DC Duffy - Lab on a Chip, 2023 - pubs.rsc.org
This paper reviews methods for detecting proteins based on molecular digitization, ie, the
isolation and detection of single protein molecules or singulated ensembles of protein …
isolation and detection of single protein molecules or singulated ensembles of protein …
TDP-43-stratified single-cell proteomics of postmortem human spinal motor neurons reveals protein dynamics in amyotrophic lateral sclerosis
A limitation of conventional bulk-tissue proteome studies in amyotrophic lateral sclerosis
(ALS) is the confounding of motor neuron (MN) signals by admixed non-MN proteins. Here …
(ALS) is the confounding of motor neuron (MN) signals by admixed non-MN proteins. Here …