A practical guide to design and assess a phylogenomic study
J Lozano-Fernandez - Genome Biology and Evolution, 2022 - academic.oup.com
Over the last decade, molecular systematics has undergone a change of paradigm as high-
throughput sequencing now makes it possible to reconstruct evolutionary relationships …
throughput sequencing now makes it possible to reconstruct evolutionary relationships …
Phylogenomic analyses highlight innovation and introgression in the continental radiations of Fagaceae across the Northern Hemisphere
BF Zhou, S Yuan, AA Crowl, YY Liang, Y Shi… - Nature …, 2022 - nature.com
Northern Hemisphere forests changed drastically in the early Eocene with the diversification
of the oak family (Fagaceae). Cooling climates over the next 20 million years fostered the …
of the oak family (Fagaceae). Cooling climates over the next 20 million years fostered the …
A molecular timescale for eukaryote evolution with implications for the origin of red algal-derived plastids
In modern oceans, eukaryotic phytoplankton is dominated by lineages with red algal-derived
plastids such as diatoms, dinoflagellates, and coccolithophores. Despite the ecological …
plastids such as diatoms, dinoflagellates, and coccolithophores. Despite the ecological …
The promise and pitfalls of synteny in phylogenomics
Reconstructing the tree of life remains a central goal in biology. Early methods, which relied
on small numbers of morphological or genetic characters, often yielded conflicting …
on small numbers of morphological or genetic characters, often yielded conflicting …
Phylogenomic resolution of the cetacean tree of life using target sequence capture
The evolution of cetaceans, from their early transition to an aquatic lifestyle to their
subsequent diversification, has been the subject of numerous studies. However, although …
subsequent diversification, has been the subject of numerous studies. However, although …
Earth history and the passerine superradiation
Avian diversification has been influenced by global climate change, plate tectonic
movements, and mass extinction events. However, the impact of these factors on the …
movements, and mass extinction events. However, the impact of these factors on the …
Phylogenomics and the rise of the angiosperms
Angiosperms are the cornerstone of most terrestrial ecosystems and human livelihoods,. A
robust understanding of angiosperm evolution is required to explain their rise to ecological …
robust understanding of angiosperm evolution is required to explain their rise to ecological …
Global Brassicaceae phylogeny based on filtering of 1,000-gene dataset
The mustard family (Brassicaceae) is a scientifically and economically important family,
containing the model plant Arabidopsis thaliana and numerous crop species that feed …
containing the model plant Arabidopsis thaliana and numerous crop species that feed …
Phylogenomics, origin, and diversification of Anthozoans (Phylum Cnidaria)
Anthozoan cnidarians (corals and sea anemones) include some of the world's most
important foundation species, capable of building massive reef complexes that support …
important foundation species, capable of building massive reef complexes that support …
Palaeoclimate ocean conditions shaped the evolution of corals and their skeletons through deep time
Identifying how past environmental conditions shaped the evolution of corals and their
skeletal traits provides a framework for predicting their persistence and that of their non …
skeletal traits provides a framework for predicting their persistence and that of their non …