[HTML][HTML] The role of metadata in reproducible computational research
Reproducible computational research (RCR) is the keystone of the scientific method for in
silico analyses, packaging the transformation of raw data to published results. In addition to …
silico analyses, packaging the transformation of raw data to published results. In addition to …
[BOOK][B] Recommender systems for learning
Technology enhanced learning (TEL) aims to design, develop and test sociotechnical
innovations that will support and enhance learning practices of both individuals and …
innovations that will support and enhance learning practices of both individuals and …
Workflow-centric research objects: First class citizens in scholarly discourse.
A workflow-centric research object bundles a workflow, the provenance of the results
obtained by its enactment, other digital objects that are relevant for the experiment (papers …
obtained by its enactment, other digital objects that are relevant for the experiment (papers …
Why workflows break—Understanding and combating decay in Taverna workflows
Workflows provide a popular means for preserving scientific methods by explicitly encoding
their process. However, some of them are subject to a decay in their ability to be re-executed …
their process. However, some of them are subject to a decay in their ability to be re-executed …
Investigating reproducibility and tracking provenance–a genomic workflow case study
Background Computational bioinformatics workflows are extensively used to analyse
genomics data, with different approaches available to support implementation and execution …
genomics data, with different approaches available to support implementation and execution …
SpringerBriefs in Computer Science
This is an introduction to multicast routing, which is the study of methods for routing from one
source to many destinations, or from many sources to many destinations. Multicast is …
source to many destinations, or from many sources to many destinations. Multicast is …
Sciunits: Reusable research objects
Science is conducted collaboratively, often requiring knowledge sharing about
computational experiments. When experiments include only datasets, they can be shared …
computational experiments. When experiments include only datasets, they can be shared …
Publishing reproducible dynamic kinetic models
Publishing repeatable and reproducible computational models is a crucial aspect of the
scientific method in computational biology and one that is often forgotten in the rush to …
scientific method in computational biology and one that is often forgotten in the rush to …
Enabling precision medicine via standard communication of HTS provenance, analysis, and results
A personalized approach based on a patient's or pathogen's unique genomic sequence is
the foundation of precision medicine. Genomic findings must be robust and reproducible …
the foundation of precision medicine. Genomic findings must be robust and reproducible …
Towards Reproducibility in Scientific Workflows: An Infrastructure‐Based Approach
I Santana-Perez… - Scientific …, 2015 - Wiley Online Library
It is commonly agreed that in silico scientific experiments should be executable and
repeatable processes. Most of the current approaches for computational experiment …
repeatable processes. Most of the current approaches for computational experiment …