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Use of molecular docking computational tools in drug discovery
Molecular docking has become an important component of the drug discovery process.
Since first being developed in the 1980s, advancements in the power of computer hardware …
Since first being developed in the 1980s, advancements in the power of computer hardware …
[HTML][HTML] Macromolecular structure determination using X-rays, neutrons and electrons: recent developments in Phenix
Diffraction (X-ray, neutron and electron) and electron cryo-microscopy are powerful methods
to determine three-dimensional macromolecular structures, which are required to …
to determine three-dimensional macromolecular structures, which are required to …
The structure assessment web server: for proteins, complexes and more
The 'structure assessment'web server is a one-stop shop for interactive evaluation and
benchmarking of structural models of macromolecular complexes including proteins and …
benchmarking of structural models of macromolecular complexes including proteins and …
ISOLDE: a physically realistic environment for model building into low-resolution electron-density maps
TI Croll - Biological Crystallography, 2018 - journals.iucr.org
This paper introduces ISOLDE, a new software package designed to provide an intuitive
environment for high-fidelity interactive remodelling/refinement of macromolecular models …
environment for high-fidelity interactive remodelling/refinement of macromolecular models …
Real-space refinement in PHENIX for cryo-EM and crystallography
This article describes the implementation of real-space refinement in the phenix.
real_space_refine program from the PHENIX suite. The use of a simplified refinement target …
real_space_refine program from the PHENIX suite. The use of a simplified refinement target …
Protein Data Bank: the single global archive for 3D macromolecular structure data
Nucleic acids research, 2019 - academic.oup.com
Abstract The Protein Data Bank (PDB) is the single global archive of experimentally
determined three-dimensional (3D) structure data of biological macromolecules. Since …
determined three-dimensional (3D) structure data of biological macromolecules. Since …
[HTML][HTML] New tools for the analysis and validation of cryo-EM maps and atomic models
PV Afonine, BP Klaholz, NW Moriarty… - Biological …, 2018 - journals.iucr.org
Recent advances in the field of electron cryomicroscopy (cryo-EM) have resulted in a rapidly
increasing number of atomic models of biomacromolecules that have been solved using this …
increasing number of atomic models of biomacromolecules that have been solved using this …
Protein Data Bank (PDB): the single global macromolecular structure archive
Abstract The Protein Data Bank (PDB)––the single global repository of experimentally
determined 3D structures of biological macromolecules and their complexes––was …
determined 3D structures of biological macromolecules and their complexes––was …
EMDB—the electron microscopy data bank
Nucleic acids research, 2024 - academic.oup.com
Abstract The Electron Microscopy Data Bank (EMDB) is the global public archive of three-
dimensional electron microscopy (3DEM) maps of biological specimens derived from …
dimensional electron microscopy (3DEM) maps of biological specimens derived from …
The RCSB protein data bank: integrative view of protein, gene and 3D structural information
Abstract The Research Collaboratory for Structural Bioinformatics Protein Data Bank (RCSB
PDB, http://rcsb. org), the US data center for the global PDB archive, makes PDB data freely …
PDB, http://rcsb. org), the US data center for the global PDB archive, makes PDB data freely …