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Microarrays, deep sequencing and the true measure of the transcriptome
Microarrays first made the analysis of the transcriptome possible, and have produced much
important information. Today, however, researchers are increasingly turning to direct high …
important information. Today, however, researchers are increasingly turning to direct high …
[HTML][HTML] The challenge of the application of'omics technologies in chemicals risk assessment: Background and outlook
UG Sauer, L Deferme, L Gribaldo… - Regulatory Toxicology …, 2017 - Elsevier
This survey by the European Centre for Ecotoxicology and Toxicology of Chemicals
(ECETOC) highlights that 'omics technologies are generally not yet applied to meet standard …
(ECETOC) highlights that 'omics technologies are generally not yet applied to meet standard …
The Trifecta study: comparing plasma levels of donor-derived cell-free DNA with the molecular phenotype of kidney transplant biopsies
Background The relationship between the donor-derived cell-free DNA fraction (dd-cfDNA
[%]) in plasma in kidney transplant recipients at time of indication biopsy and gene …
[%]) in plasma in kidney transplant recipients at time of indication biopsy and gene …
[كتاب][B] Singular spectrum analysis of biomedical signals
S Sanei, H Hassani - 2015 - books.google.com
This book presents newly applied concepts for biomedical applications of singular spectrum
analysis (SSA) and introduces a new mathematical and signal processing technique for the …
analysis (SSA) and introduces a new mathematical and signal processing technique for the …
RNA-seq and microarray complement each other in transcriptome profiling
Background RNA-seq and microarray are the two popular methods employed for genome-
wide transcriptome profiling. Current comparison studies have shown that transcriptome …
wide transcriptome profiling. Current comparison studies have shown that transcriptome …
The molecular microscope diagnostic system: assessment of rejection and injury in heart transplant biopsies
This review describes the development of the Molecular Microscope Diagnostic System
(MMDx) for heart transplant endomyocardial biopsies (EMBs). MMDx-Heart uses …
(MMDx) for heart transplant endomyocardial biopsies (EMBs). MMDx-Heart uses …
[HTML][HTML] Skeletal muscle gene expression in response to resistance exercise: sex specific regulation
The molecular mechanisms underlying the sex differences in human muscle morphology
and function remain to be elucidated. The sex differences in the skeletal muscle …
and function remain to be elucidated. The sex differences in the skeletal muscle …
Identification of differentially expressed genes using an annealing control primer system in stage III serous ovarian carcinoma
YS Kim, J Hwan Do, S Bae, DH Bae, W Shick Ahn - BMC cancer, 2010 - Springer
Background Most patients with ovarian cancer are diagnosed with advanced stage disease
(ie., stage III-IV), which is associated with a poor prognosis. Differentially expressed genes …
(ie., stage III-IV), which is associated with a poor prognosis. Differentially expressed genes …
Logistic regression with adaptive sparse group lasso penalty and its application in acute leukemia diagnosis
J Li, K Liang, X Song - Computers in Biology and Medicine, 2022 - Elsevier
Cancer diagnosis based on gene expression profile data has attracted extensive attention in
computational biology and medicine. It suffers from three challenges in practical …
computational biology and medicine. It suffers from three challenges in practical …
Apparently low reproducibility of true differential expression discoveries in microarray studies
Motivation: Differentially expressed gene (DEG) lists detected from different microarray
studies for a same disease are often highly inconsistent. Even in technical replicate tests …
studies for a same disease are often highly inconsistent. Even in technical replicate tests …