In vitro selection of functional nucleic acids

DS Wilson, JW Szostak - Annual review of biochemistry, 1999 - annualreviews.org
▪ Abstract In vitro selection allows rare functional RNA or DNA molecules to be isolated from
pools of over 1015 different sequences. This approach has been used to identify RNA and …

Binuclear metallohydrolases

DE Wilcox - Chemical Reviews, 1996 - ACS Publications
Metabolic and signaling biochemical pathways have numerous steps that involve the
hydrolytic cleavage of peptide or phosphate ester bonds. Although both types of bonds are …

A general purpose RNA-cleaving DNA enzyme

SW Santoro, GF Joyce - Proceedings of the national academy of sciences, 1997 - pnas.org
An in vitro selection procedure was used to develop a DNA enzyme that can be made to
cleave almost any targeted RNA substrate under simulated physiological conditions. The …

Isolation of new ribozymes from a large pool of random sequences

DP Bartel, JW Szostak - Science, 1993 - science.org
An iterative in vitro selection procedure was used to isolate a new class of catalytic RNAs
(ribozymes) from a large pool of random-sequence RNA molecules. These ribozymes ligate …

A single-molecule study of RNA catalysis and folding

X Zhuang, LE Bartley, HP Babcock, R Russell, T Ha… - Science, 2000 - science.org
Using fluorescence microscopy, we studied the catalysis by and folding of individual
Tetrahymena thermophila ribozyme molecules. The dye-labeled and surface-immobilized …

RNA catalysis through compartmentalization

CA Strulson, RC Molden, CD Keating… - Nature chemistry, 2012 - nature.com
RNA performs important cellular functions in contemporary life forms. Its ability to act both as
a catalyst and a storage mechanism for genetic information is also an important part of the …

Mechanism and utility of an RNA-cleaving DNA enzyme

SW Santoro, GF Joyce - Biochemistry, 1998 - ACS Publications
We previously reported the in vitro selection of a general-purpose RNA-cleaving DNA
enzyme that exhibits a catalytic efficiency (k cat/KM) exceeding that of any other known …

Ribozyme structures and mechanisms

EA Doherty, JA Doudna - Annual review of biochemistry, 2000 - annualreviews.org
▪ Abstract The past few years have seen exciting advances in understanding the structure
and function of catalytic RNA. Crystal structures of several ribozymes have provided detailed …

Cryo-EM reveals dynamics of Tetrahymena group I intron self-splicing

B Luo, C Zhang, X Ling, S Mukherjee, G Jia, J **e… - Nature Catalysis, 2023 - nature.com
The group I self-splicing introns, like other RNAs and RNA–protein complexes, undergo
multiple conformational changes in completing two transesterification reactions that cleave …

Directed evolution of an RNA enzyme

AA Beaudry, GF Joyce - Science, 1992 - science.org
An in vitro evolution procedure was used to obtain RNA enzymes with a particular catalytic
function. A population of 1013 variants of the Tetrahymena ribozyme, a group I ribozyme that …