Exploring cereal metagenomics: unravelling microbial communities for improved food security

K Masenya, MC Manganyi, TB Dikobe - Microorganisms, 2024 - mdpi.com
Food security is an urgent global challenge, with cereals playing a crucial role in meeting
the nutritional requirements of populations worldwide. In recent years, the field of …

[HTML][HTML] The Triticeae CBF Gene Cluster—To Frost Resistance and Beyond

G Caccialupi, J Milc, F Caradonia, MF Nasar, E Francia - Cells, 2023 - mdpi.com
The pivotal role of CBF/DREB1 transcriptional factors in Triticeae crops involved in the
abiotic stress response has been highlighted. The CBFs represent an important hub in the …

Structural variants in 3000 rice genomes

RR Fuentes, D Chebotarov, J Duitama, S Smith… - Genome …, 2019 - genome.cshlp.org
Investigation of large structural variants (SVs) is a challenging yet important task in
understanding trait differences in highly repetitive genomes. Combining different …

Variation in linked selection and recombination drive genomic divergence during allopatric speciation of European and American aspens

J Wang, NR Street, DG Scofield… - Molecular Biology and …, 2016 - academic.oup.com
Despite the global economic and ecological importance of forest trees, the genomic basis of
differential adaptation and speciation in tree species is still poorly understood. Populus …

Glucosylation prevents plant defense activation in phloem-feeding insects

O Malka, MLAE Easson, C Paetz, M Götz… - Nature Chemical …, 2020 - nature.com
The metabolic adaptations by which phloem-feeding insects counteract plant defense
compounds are poorly known. Two-component plant defenses, such as glucosinolates …

Accurate prediction of quantitative traits with failed SNP calls in canola and maize

SE Weber, HS Chawla, L Ehrig, LT Hickey… - Frontiers in plant …, 2023 - frontiersin.org
In modern plant breeding, genomic selection is becoming the gold standard to select
superior genotypes in large breeding populations that are only partially phenotyped. Many …

[HTML][HTML] Next-Generation Sequencing of Local Romanian Tomato Varieties and Bioinformatics Analysis of the Ve Locus

AA Udriște, M Iordachescu, R Ciceoi… - International Journal of …, 2022 - mdpi.com
Genetic variability is extremely important, not only for the species' adaptation to
environmental challenges, but also for the creation of novel varieties through plant breeding …

Genome-wide association analysis reveals 6 copy number variations associated with the number of cervical vertebrae in Pekin ducks

Y Xu, J Hu, W Fan, H Liu, Y Zhang, Z Guo… - Frontiers in Cell and …, 2022 - frontiersin.org
As a critical developmental stage in vertebrates, the vertebral column formation process is
under strict control; however, we observed variations in the number of cervical vertebrae in …

Chromosome-level genome assembly of Dongxiang wild rice (Oryza rufipogon) provides insights into resistance to disease and freezing

Z Que, Q Lu, C Shen - Frontiers in Genetics, 2022 - frontiersin.org
Dongxiang wild rice (DXWR, Oryza rufipogon Griff.) belongs to common wild rice O.
rufipogon, which is the well-known ancestral progenitor of cultivated rice, possessing …

High-Density Linkage Maps from Japanese Rice japonica Recombinant Inbred Lines Using Genoty** by Random Amplicon Sequencing-Direct (GRAS-Di)

R Fekih, Y Ishimaru, S Okada, M Maeda, R Miyagi… - Plants, 2023 - mdpi.com
The genetic dissection of agronomically important traits in closely related Japanese rice
cultivars is still in its infancy mainly because of the narrow genetic diversity within japonica …