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Survey for a Decade of Coding for DNA Storage
Advancements in DNA synthesis and sequencing technologies have enabled the storage of
data on synthetic DNA strands. However, realizing its potential relies on the design of …
data on synthetic DNA strands. However, realizing its potential relies on the design of …
DNA-based data storage systems: A review of implementations and code constructions
This invited review paper has the aim to acquaint the communication theory community with
the emerging topic of molecular data storage. The exposition includes an overview of basic …
the emerging topic of molecular data storage. The exposition includes an overview of basic …
[HTML][HTML] BO-DNA: Biologically optimized encoding model for a highly-reliable DNA data storage
DNA data storage is a promising technology that utilizes computer simulation, and synthetic
biology, offering high-density and reliable digital information storage. It is challenging to …
biology, offering high-density and reliable digital information storage. It is challenging to …
DNA synthesis using shortmers
In conventional DNA synthesis machines many strands are usually synthesized in parallel
by iterating through a supersequence s and adding in each cycle a single nucleotide to a …
by iterating through a supersequence s and adding in each cycle a single nucleotide to a …
Optimal reference for DNA synthesis
In recent years, DNA has emerged as a potentially viable storage technology. DNA
synthesis, which refers to the task of writing the data into DNA, is perhaps the most costly …
synthesis, which refers to the task of writing the data into DNA, is perhaps the most costly …
Constructions and properties of efficient DNA synthesis codes
We report on coding methods for efficiently synthesizing deoxyribonucleic acid (DNA) for
massive data storage, where a plurality of DNA strands are synthesized in parallel. We …
massive data storage, where a plurality of DNA strands are synthesized in parallel. We …
Multivariate analytic combinatorics for cost constrained channels and subsequence enumeration
Analytic combinatorics in several variables is a powerful tool for deriving the asymptotic
behavior of combinatorial quantities by analyzing multivariate generating functions. We …
behavior of combinatorial quantities by analyzing multivariate generating functions. We …
On the Long-Term Behavior of k-tuples Frequencies in Mutation Systems
O Elishco - IEEE Transactions on Information Theory, 2024 - ieeexplore.ieee.org
In response to the evolving landscape of data storage, researchers have increasingly
explored non-traditional platforms, with DNA-based storage emerging as a cutting-edge …
explored non-traditional platforms, with DNA-based storage emerging as a cutting-edge …
Evaluation of the Gilbert–Varshamov bound using multivariate analytic combinatorics
Analytic combinatorics in several variables refers to a suite of tools that provide sharp
asymptotic estimates for certain combinatorial quantities. In this paper, we apply these tools …
asymptotic estimates for certain combinatorial quantities. In this paper, we apply these tools …
On DNA Synthesis Using Shortmers and the Capacity of Non-deterministic Costly Constrained Graphs
In conventional DNA synthesis machines, usually many strands are synthesized in parallel
by iterating through a supersequence s and adding in each cycle the next nucleotide to a …
by iterating through a supersequence s and adding in each cycle the next nucleotide to a …