Bayesian statistics and modelling

R Van de Schoot, S Depaoli, R King… - Nature Reviews …, 2021 - nature.com
Bayesian statistics is an approach to data analysis based on Bayes' theorem, where
available knowledge about parameters in a statistical model is updated with the information …

Uncovering ecological state dynamics with hidden Markov models

BT McClintock, R Langrock, O Gimenez, E Cam… - Ecology …, 2020 - Wiley Online Library
Ecological systems can often be characterised by changes among a finite set of underlying
states pertaining to individuals, populations, communities or entire ecosystems through time …

A guide to state–space modeling of ecological time series

M Auger‐Méthé, K Newman, D Cole… - Ecological …, 2021 - Wiley Online Library
State–space models (SSMs) are an important modeling framework for analyzing ecological
time series. These hierarchical models are commonly used to model population dynamics …

[HTML][HTML] Overcoming the data crisis in biodiversity conservation

HK Kindsvater, NK Dulvy, C Horswill… - Trends in Ecology & …, 2018 - cell.com
How can we track population trends when monitoring data are sparse? Population declines
can go undetected, despite ongoing threats. For example, only one of every 200 harvested …

Species-Habitat Associations: Spatial data, predictive models, and ecological insights

J Matthiopoulos, JR Fieberg, G Aarts - 2023 - conservancy.umn.edu
Ecologists develop species-habitat association (SHA) models to understand where species
occur, why they are there and where else they might be. This knowledge can be used to …

State-space models' dirty little secrets: even simple linear Gaussian models can have estimation problems

M Auger-Méthé, C Field, CM Albertsen, AE Derocher… - Scientific reports, 2016 - nature.com
State-space models (SSMs) are increasingly used in ecology to model time-series such as
animal movement paths and population dynamics. This type of hierarchical model is often …

Improved state‐space models for inference about spatial and temporal variation in abundance from count data

JA Hostetler, RB Chandler - Ecology, 2015 - Wiley Online Library
Models of population dynamics are frequently used for purposes such as testing hypotheses
about density dependence and predicting species' responses to future environmental …

Assessing abundance of populations with limited data: Lessons learned from data-poor fisheries stock assessment

A Chrysafi, A Kuparinen - Environmental Reviews, 2016 - cdnsciencepub.com
Estimation of population abundances in the absence of good observational data are
notoriously difficult, yet urgently needed for biodiversity conservation and sustainable use of …

State‐space models for ecological time‐series data: Practical model‐fitting

K Newman, R King, V Elvira… - Methods in Ecology …, 2023 - Wiley Online Library
State‐space models are an increasingly common and important tool in the quantitative
ecologists' armoury, particularly for the analysis of time‐series data. This is due to both their …

[PDF][PDF] Realising the promise of large data and complex models

R McCrea, R King, L Graham… - Methods in Ecology and …, 2023 - research.ed.ac.uk
In an era of rapid change, ecologists are increasingly asked to provide answers to big,
urgent 15 questions of global concern (Solé and Levin, 2022; Yates et al., 2018; Sutherland …