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Third generation antibody discovery methods: in silico rational design
Owing to their outstanding performances in molecular recognition, antibodies are
extensively used in research and applications in molecular biology, biotechnology and …
extensively used in research and applications in molecular biology, biotechnology and …
Structural aspects of the allergen-antibody interaction
A Pomés, GA Mueller, M Chruszcz - Frontiers in immunology, 2020 - frontiersin.org
The development of allergic disease involves the production of IgE antibodies upon allergen
exposure in a process called sensitization. IgE binds to receptors on the surface of mast …
exposure in a process called sensitization. IgE binds to receptors on the surface of mast …
In-silico evidence for a two receptor based strategy of SARS-CoV-2
We propose a computational investigation on the interaction mechanisms between SARS-
CoV-2 spike protein and possible human cell receptors. In particular, we make use of our …
CoV-2 spike protein and possible human cell receptors. In particular, we make use of our …
Antibody specific B-cell epitope predictions: leveraging information from antibody-antigen protein complexes
B-cells can neutralize pathogenic molecules by targeting them with extreme specificity using
receptors secreted or expressed on their surface (antibodies). This is achieved via molecular …
receptors secreted or expressed on their surface (antibodies). This is achieved via molecular …
Rapid and accurate in silico solubility screening of a monoclonal antibody library
Antibodies represent essential tools in research and diagnostics and are rapidly growing in
importance as therapeutics. Commonly used methods to obtain novel antibodies typically …
importance as therapeutics. Commonly used methods to obtain novel antibodies typically …
Molecular mechanisms behind anti SARS-CoV-2 action of lactoferrin
Despite the huge effort to contain the infection, the novel SARS-CoV-2 coronavirus has
rapidly become pandemic, mainly due to its extremely high human-to-human transmission …
rapidly become pandemic, mainly due to its extremely high human-to-human transmission …
Assessment of therapeutic antibody developability by combinations of in vitro and in silico methods
AM Wolf Pérez, N Lorenzen, M Vendruscolo… - … Antibodies: Methods and …, 2022 - Springer
Although antibodies have become the fastest-growing class of therapeutics on the market, it
is still challenging to develop them for therapeutic applications, which often require these …
is still challenging to develop them for therapeutic applications, which often require these …
Real time structural search of the Protein Data Bank
Detection of protein structure similarity is a central challenge in structural bioinformatics.
Comparisons are usually performed at the polypeptide chain level, however the functional …
Comparisons are usually performed at the polypeptide chain level, however the functional …
A computational method for immune repertoire mining that identifies novel binders from different clonotypes, demonstrated by identifying anti-pertussis toxoid …
Due to their shared genetic history, antibodies from the same clonotype often bind to the
same epitope. This knowledge is used in immune repertoire mining, where known binders …
same epitope. This knowledge is used in immune repertoire mining, where known binders …
[HTML][HTML] 2D Zernike polynomial expansion: Finding the protein-protein binding regions
We present a method for efficiently and effectively assessing whether and where two
proteins can interact with each other to form a complex. This is still largely an open problem …
proteins can interact with each other to form a complex. This is still largely an open problem …