[CARTE][B] Handbook of data structures and applications

DP Mehta, S Sahni - 2004 - taylorfrancis.com
Although there are many advanced and specialized texts and handbooks on algorithms,
until now there was no book that focused exclusively on the wide variety of data structures …

Compressed representations of sequences and full-text indexes

P Ferragina, G Manzini, V Mäkinen… - ACM Transactions on …, 2007 - dl.acm.org
Given a sequence S= s 1 s 2… sn of integers smaller than r= O (polylog (n)), we show how S
can be represented using nH 0 (S)+ o (n) bits, so that we can know any sq, as well as …

Optimal-time text indexing in BWT-runs bounded space

T Gagie, G Navarro, N Prezza - Proceedings of the Twenty-Ninth Annual ACM …, 2018 - SIAM
Indexing highly repetitive texts—such as genomic databases, software repositories and
versioned text collections—has become an important problem since the turn of the …

Succincter

M Patrascu - 2008 49th Annual IEEE Symposium on …, 2008 - ieeexplore.ieee.org
We can represent an array of n values from {0, 1, 2} using ceil (n log_2 3) bits (arithmetic
coding), but then we cannot retrieve a single element efficiently. Instead, we can encode …

On compressing and indexing repetitive sequences

S Kreft, G Navarro - Theoretical Computer Science, 2013 - Elsevier
We introduce LZ-End, a new member of the Lempel–Ziv family of text compressors, which
achieves compression ratios close to those of LZ77 but is much faster at extracting arbitrary …

Rank/Select Operations on Large Alphabets: a Tool for Text

A Golynski - Proceedings of the Seventeenth Annual ACM-SIAM …, 2006 - books.google.com
We consider a generalization of the problem of sup-porting rank and select queries on
binary strings. Given a string of length n from an alphabet of size σ, we give the first …

Compressed text indexes: From theory to practice

P Ferragina, R González, G Navarro… - Journal of Experimental …, 2009 - dl.acm.org
A compressed full-text self-index represents a text in a compressed form and still answers
queries efficiently. This represents a significant advancement over the (full-) text indexing …

Compressing and indexing labeled trees, with applications

P Ferragina, F Luccio, G Manzini… - Journal of the ACM …, 2009 - dl.acm.org
Consider an ordered, static tree T where each node has a label from alphabet Σ. Tree T may
be of arbitrary degree and shape. Our goal is designing a compressed storage scheme of T …

Practical rank/select queries over arbitrary sequences

F Claude, G Navarro - International Symposium on String Processing and …, 2008 - Springer
We present a practical study on the compact representation of sequences supporting rank,
select, and access queries. While there are several theoretical solutions to the problem, only …

LZ77-like compression with fast random access

S Kreft, G Navarro - 2010 Data Compression Conference, 2010 - ieeexplore.ieee.org
We introduce an alternative Lempel-Ziv text parsing, LZ-End, that converges to the entropy
and in practice gets very close to LZ77. LZ-End forces sources to finish at the end of a …