[PDF][PDF] Protein stability: a crystallographer's perspective
Protein stability is a topic of major interest for the biotechnology, pharmaceutical and food
industries, in addition to being a daily consideration for academic researchers studying …
industries, in addition to being a daily consideration for academic researchers studying …
Investigating protein–ligand interactions by solution nuclear magnetic resonance spectroscopy
W Becker, KC Bhattiprolu, N Gubensäk… - …, 2018 - Wiley Online Library
Protein–ligand interactions are of fundamental importance in almost all processes in living
organisms. The ligands comprise small molecules, drugs or biological macromolecules and …
organisms. The ligands comprise small molecules, drugs or biological macromolecules and …
POTENCI: prediction of temperature, neighbor and pH-corrected chemical shifts for intrinsically disordered proteins
Chemical shifts contain important site-specific information on the structure and dynamics of
proteins. Deviations from statistical average values, known as random coil chemical shifts …
proteins. Deviations from statistical average values, known as random coil chemical shifts …
Predicting chemical shifts with graph neural networks
Inferring molecular structure from Nuclear Magnetic Resonance (NMR) measurements
requires an accurate forward model that can predict chemical shifts from 3D structure …
requires an accurate forward model that can predict chemical shifts from 3D structure …
NMR experiments for studies of dilute and condensed protein phases: application to the phase-separating protein CAPRIN1
LE Wong, TH Kim, DR Muhandiram… - Journal of the …, 2020 - ACS Publications
Intrinsically disordered proteins (IDPs) or regions of intrinsic disorder in otherwise folded
proteins (IDRs) play important roles in many different biological processes, including …
proteins (IDRs) play important roles in many different biological processes, including …
Application of NMR to studies of intrinsically disordered proteins
The prevalence of intrinsically disordered protein regions, particularly in eukaryotic proteins,
and their clear functional advantages for signaling and gene regulation have created an …
and their clear functional advantages for signaling and gene regulation have created an …
Chemical exchange
AG Palmer III, H Koss - Methods in enzymology, 2019 - Elsevier
The phenomenon of chemical or conformational exchange in NMR spectroscopy has
enabled detailed characterization of time-dependent aspects of biomolecular function …
enabled detailed characterization of time-dependent aspects of biomolecular function …
Quality and bias of protein disorder predictors
Disorder in proteins is vital for biological function, yet it is challenging to characterize.
Therefore, methods for predicting protein disorder from sequence are fundamental …
Therefore, methods for predicting protein disorder from sequence are fundamental …
Single molecule FRET: A powerful tool to study intrinsically disordered proteins
SJ LeBlanc, P Kulkarni, KR Weninger - Biomolecules, 2018 - mdpi.com
Intrinsically disordered proteins (IDPs) are often modeled using ideas from polymer physics
that suggest they smoothly explore all corners of configuration space. Experimental …
that suggest they smoothly explore all corners of configuration space. Experimental …
Structure determination by single-particle cryo-electron microscopy: only the sky (and intrinsic disorder) is the limit
Traditionally, X-ray crystallography and NMR spectroscopy represent major workhorses of
structural biologists, with the lion share of protein structures reported in protein data bank …
structural biologists, with the lion share of protein structures reported in protein data bank …