RESCRIPt: Reproducible sequence taxonomy reference database management

MS Robeson, DR O'Rourke, BD Kaehler… - PLoS computational …, 2021‏ - journals.plos.org
Nucleotide sequence and taxonomy reference databases are critical resources for
widespread applications including marker-gene and metagenome sequencing for …

Vega-lite: A grammar of interactive graphics

A Satyanarayan, D Moritz… - IEEE transactions on …, 2016‏ - ieeexplore.ieee.org
We present Vega-Lite, a high-level grammar that enables rapid specification of interactive
data visualizations. Vega-Lite combines a traditional grammar of graphics, providing visual …

Visualizing dataflow graphs of deep learning models in tensorflow

K Wongsuphasawat, D Smilkov… - IEEE transactions on …, 2017‏ - ieeexplore.ieee.org
We present a design study of the TensorFlow Graph Visualizer, part of the TensorFlow
machine intelligence platform. This tool helps users understand complex machine learning …

[HTML][HTML] ECharts: a declarative framework for rapid construction of web-based visualization

D Li, H Mei, Y Shen, S Su, W Zhang, J Wang, M Zu… - Visual Informatics, 2018‏ - Elsevier
While there have been a dozen of authoring systems and programming toolkits for visual
design and development, users who do not have programming skills, such as data analysts …

The design space of construction tools for information visualization: A survey

H Mei, Y Ma, Y Wei, W Chen - Journal of Visual Languages & Computing, 2018‏ - Elsevier
Abstract Information visualization has been widely used to convey information from data and
assist communication. There are enormous needs of efficient visualization design for users …

Vizml: A machine learning approach to visualization recommendation

K Hu, MA Bakker, S Li, T Kraska… - Proceedings of the 2019 …, 2019‏ - dl.acm.org
Visualization recommender systems aim to lower the barrier to exploring basic visualizations
by automatically generating results for analysts to search and select, rather than manually …

q2-longitudinal: longitudinal and paired-sample analyses of microbiome data

NA Bokulich, MR Dillon, Y Zhang, JR Rideout… - …, 2018‏ - journals.asm.org
Studies of host-associated and environmental microbiomes often incorporate longitudinal
sampling or paired samples in their experimental design. Longitudinal sampling provides …

Reactive vega: A streaming dataflow architecture for declarative interactive visualization

A Satyanarayan, R Russell… - IEEE transactions on …, 2015‏ - ieeexplore.ieee.org
We present Reactive Vega, a system architecture that provides the first robust and
comprehensive treatment of declarative visual and interaction design for data visualization …

Applying pragmatics principles for interaction with visual analytics

E Hoque, V Setlur, M Tory… - IEEE transactions on …, 2017‏ - ieeexplore.ieee.org
Interactive visual data analysis is most productive when users can focus on answering the
questions they have about their data, rather than focusing on how to operate the interface to …

The design space of visualization tools for data science education: Literature review and framework for future designs

C Fernandez, JA Freitas, P Blikstein… - International Journal of …, 2024‏ - Elsevier
Data science education is a rapidly growing field, motivating the development of several
tools aimed at engaging students in data-related activities across all educational levels …