After the pandemic: perspectives on the future trajectory of COVID-19
There is a realistic expectation that the global effort in vaccination will bring the pandemic
caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) under control …
caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) under control …
Inferring the mammal tree: species-level sets of phylogenies for questions in ecology, evolution, and conservation
Big, time-scaled phylogenies are fundamental to connecting evolutionary processes to
modern biodiversity patterns. Yet inferring reliable phylogenetic trees for thousands of …
modern biodiversity patterns. Yet inferring reliable phylogenetic trees for thousands of …
Ongoing global and regional adaptive evolution of SARS-CoV-2
Understanding the trends in severe acute respiratory syndrome coronavirus 2 (SARS-CoV-
2) evolution is paramount to control the COVID-19 pandemic. We analyzed more than …
2) evolution is paramount to control the COVID-19 pandemic. We analyzed more than …
Natural selection in the evolution of SARS-CoV-2 in bats created a generalist virus and highly capable human pathogen
Virus host shifts are generally associated with novel adaptations to exploit the cells of the
new host species optimally. Surprisingly, Severe Acute Respiratory Syndrome Coronavirus …
new host species optimally. Surprisingly, Severe Acute Respiratory Syndrome Coronavirus …
[HTML][HTML] On the evolutionary epidemiology of SARS-CoV-2
There is no doubt that the novel coronavirus SARS-CoV-2 that causes COVID-19 is mutating
and thus has the potential to adapt during the current pandemic. Whether this evolution will …
and thus has the potential to adapt during the current pandemic. Whether this evolution will …
Global disparities in SARS-CoV-2 genomic surveillance
Genomic sequencing is essential to track the evolution and spread of SARS-CoV-2, optimize
molecular tests, treatments, vaccines, and guide public health responses. To investigate the …
molecular tests, treatments, vaccines, and guide public health responses. To investigate the …
Unlocking capacities of genomics for the COVID-19 response and future pandemics
During the COVID-19 pandemic, genomics and bioinformatics have emerged as essential
public health tools. The genomic data acquired using these methods have supported the …
public health tools. The genomic data acquired using these methods have supported the …
A highly virulent variant of HIV-1 circulating in the Netherlands
We discovered a highly virulent variant of subtype-B HIV-1 in the Netherlands. One hundred
nine individuals with this variant had a 0.54 to 0.74 log10 increase (ie, a~ 3.5-fold to 5.5-fold …
nine individuals with this variant had a 0.54 to 0.74 log10 increase (ie, a~ 3.5-fold to 5.5-fold …
[HTML][HTML] Distinct viral clades of SARS‐CoV‐2: implications for modeling of viral spread
A Brufsky - Journal of medical virology, 2020 - ncbi.nlm.nih.gov
A current model of the coronavirus disease 2019 (COVID‐19) epidemic 1 appears to have
differing degrees of projected total deaths in various areas of the United States despite the …
differing degrees of projected total deaths in various areas of the United States despite the …