Effect of diet on the gut microbiota: rethinking intervention duration

ER Leeming, AJ Johnson, TD Spector, CI Le Roy - Nutrients, 2019 - mdpi.com
The human gut is inhabited by trillions of microorganisms composing a dynamic ecosystem
implicated in health and disease. The composition of the gut microbiota is unique to each …

The effects of temperature on animal gut microbiomes

J Sepulveda, AH Moeller - Frontiers in microbiology, 2020 - frontiersin.org
Temperature is a prominent abiotic environmental variable that drives the adaptive
trajectories of animal lineages and structures the composition of animal communities. Global …

Cryptic diversity of cellulose-degrading gut bacteria in industrialized humans

S Moraïs, S Winkler, A Zorea, L Levin, FSP Nagies… - Science, 2024 - science.org
Humans, like all mammals, depend on the gut microbiome for digestion of cellulose, the
main component of plant fiber. However, evidence for cellulose fermentation in the human …

Microbial transmission in animal social networks and the social microbiome

A Sarkar, S Harty, KVA Johnson, AH Moeller… - Nature ecology & …, 2020 - nature.com
Host-associated microbiomes play an increasingly appreciated role in animal metabolism,
immunity and health. The microbes in turn depend on their host for resources and can be …

Analysis of 1321 Eubacterium rectale genomes from metagenomes uncovers complex phylogeographic population structure and subspecies functional adaptations

N Karcher, E Pasolli, F Asnicar, KD Huang, A Tett… - Genome biology, 2020 - Springer
Background Eubacterium rectale is one of the most prevalent human gut bacteria, but its
diversity and population genetics are not well understood because large-scale whole …

Seasonal variations in the composition and functional profiles of gut microbiota reflect dietary changes in plateau pikas

C Fan, L Zhang, S Jia, X Tang, H Fu, W Li… - Integrative …, 2022 - Wiley Online Library
Seasonal variations in gut microbiota of small mammals and how they are influenced by
environmental variables are relatively poorly understood. We sampled 162 wild plateau …

Age and sex-associated variation in the multi-site microbiome of an entire social group of free-ranging rhesus macaques

MC Janiak, MJ Montague, CI Villamil, MK Stock… - Microbiome, 2021 - Springer
Background An individual's microbiome changes over the course of its lifetime, especially
during infancy, and again in old age. Confounding factors such as diet and healthcare make …

Reproductive hormones mediate changes in the gut microbiome during pregnancy and lactation in Phayre's leaf monkeys

EK Mallott, C Borries, A Koenig, KR Amato, A Lu - Scientific reports, 2020 - nature.com
Studies in multiple host species have shown that gut microbial diversity and composition
change during pregnancy and lactation. However, the specific mechanisms underlying …

Synchrony and idiosyncrasy in the gut microbiome of wild baboons

JR Björk, MR Dasari, K Roche, L Grieneisen… - Nature Ecology & …, 2022 - nature.com
Human gut microbial dynamics are highly individualized, making it challenging to link
microbiota to health and to design universal microbiome therapies. This individuality is …

Host phylogeny and host ecology structure the mammalian gut microbiota at different taxonomic scales

CA Rojas, S Ramírez-Barahona, KE Holekamp… - Animal Microbiome, 2021 - Springer
The gut microbiota is critical for host function. Among mammals, host phylogenetic
relatedness and diet are strong drivers of gut microbiota structure, but one factor may be …