Emerging diversity in lipid–protein interactions

V Corradi, BI Sejdiu, H Mesa-Galloso… - Chemical …, 2019 - ACS Publications
Membrane lipids interact with proteins in a variety of ways, ranging from providing a stable
membrane environment for proteins to being embedded in to detailed roles in complicated …

Multiscale modelling and simulation of viruses

JK Marzinek, RG Huber, PJ Bond - Current opinion in structural biology, 2020 - Elsevier
Highlights•Advances in structural biology and integrative modelling yield (near)-atomic
resolution structures of complete viruses.•Computer simulations can now elucidate the …

[HTML][HTML] SARS-CoV-2 spike protein removes lipids from model membranes and interferes with the capacity of high density lipoprotein to exchange lipids

Y Correa, S Waldie, M Thépaut, S Micciulla… - Journal of Colloid and …, 2021 - Elsevier
Cholesterol has been shown to affect the extent of coronavirus binding and fusion to cellular
membranes. The severity of Covid-19 infection is also known to be correlated with lipid …

[HTML][HTML] Investigation on the relationship between lipid composition and structure in model membranes composed of extracted natural phospholipids

A Santamaria, KC Batchu, G Fragneto, V Laux… - Journal of colloid and …, 2023 - Elsevier
Hypothesis Unravelling the structural diversity of cellular membranes is a paramount
challenge in life sciences. In particular, lipid composition affects the membrane collective …

Highly basic clusters in the herpes simplex virus 1 nuclear egress complex drive membrane budding by inducing lipid ordering

MK Thorsen, A Lai, MW Lee, DP Hoogerheide… - MBio, 2021 - journals.asm.org
During replication of herpesviruses, capsids escape from the nucleus into the cytoplasm by
budding at the inner nuclear membrane. This unusual process is mediated by the viral …

Computational modelling of flavivirus dynamics: The ins and outs

RG Huber, JK Marzinek, PLS Boon, W Yue, PJ Bond - Methods, 2021 - Elsevier
Enveloped viruses such as the flaviviruses represent a significant burden to human health
around the world, with hundreds of millions of people each year affected by dengue alone …

[HTML][HTML] Mutually beneficial combination of molecular dynamics computer simulations and scattering experiments

N Zec, G Mangiapia, AC Hendry, R Barker… - Membranes, 2021 - mdpi.com
We showcase the combination of experimental neutron scattering data and molecular
dynamics (MD) simulations for exemplary phospholipid membrane systems. Neutron and X …

[HTML][HTML] Membrane fusion by dengue virus: The first step

J Villalaín - Biochimica et Biophysica Acta (BBA)-Biomembranes, 2025 - Elsevier
Flaviviruses include important human pathogens such as Dengue, Zika, West Nile, Yellow
fever, Japanese encephalitis, and Tick-borne encephalitis viruses as well as some emerging …

Effect of cholesterol on the membrane partitioning dynamics of hepatitis A virus-2B peptide

S Sikdar, M Banerjee, S Vemparala - Soft Matter, 2021 - pubs.rsc.org
Understanding viral peptide detection and partitioning and the subsequent host membrane
composition-based response is essential for gaining insights into the viral mechanism. Here …

Single-molecule studies of flavivirus envelope dynamics: Experiment and computation

KK Sharma, JK Marzinek, SN Tantirimudalige… - Progress in Biophysics …, 2019 - Elsevier
Flaviviruses are simple enveloped viruses exhibiting complex structural and functional
heterogeneities. Decades of research have provided crucial basic insights, antiviral …