Affinity‐purification coupled to mass spectrometry: Basic principles and strategies
WH Dunham, M Mullin, AC Gingras - Proteomics, 2012 - Wiley Online Library
Identifying the interactions established by a protein of interest can be a critical step in
understanding its function. This is especially true when an unknown protein of interest is …
understanding its function. This is especially true when an unknown protein of interest is …
Recent progress in mass spectrometry proteomics for biomedical research
Proteins are the key players in many cellular processes. Their composition, trafficking, and
interactions underlie the dynamic processes of life. Furthermore, diseases are frequently …
interactions underlie the dynamic processes of life. Furthermore, diseases are frequently …
[HTML][HTML] A census of human soluble protein complexes
Cellular processes often depend on stable physical associations between proteins. Despite
recent progress, knowledge of the composition of human protein complexes remains limited …
recent progress, knowledge of the composition of human protein complexes remains limited …
SMN and symmetric arginine dimethylation of RNA polymerase II C-terminal domain control termination
The carboxy-terminal domain (CTD) of the RNA polymerase II (RNAP II) subunit POLR2A is
a platform for modifications specifying the recruitment of factors that regulate transcription …
a platform for modifications specifying the recruitment of factors that regulate transcription …
Proximity biotinylation and affinity purification are complementary approaches for the interactome map** of chromatin-associated protein complexes
Map** protein–protein interactions for chromatin-associated proteins remains
challenging. Here we explore the use of BioID, a proximity biotinylation approach in which a …
challenging. Here we explore the use of BioID, a proximity biotinylation approach in which a …
[HTML][HTML] Regulation of CD133 by HDAC6 promotes β-catenin signaling to suppress cancer cell differentiation
AB Mak, AML Nixon, S Kittanakom, JM Stewart… - Cell reports, 2012 - cell.com
The pentaspan membrane glycoprotein CD133 marks lineage-specific cancer progenitor
cells and is associated with poor prognosis in a number of tumor types. Despite its utility as a …
cells and is associated with poor prognosis in a number of tumor types. Despite its utility as a …
Protein-protein interaction networks: probing disease mechanisms using model systems
Protein-protein interactions (PPIs) and multi-protein complexes perform central roles in the
cellular systems of all living organisms. In humans, disruptions of the normal patterns of PPIs …
cellular systems of all living organisms. In humans, disruptions of the normal patterns of PPIs …
Cancer‐associated somatic DICER1 hotspot mutations cause defective miRNA processing and reverse‐strand expression bias to predominantly mature 3p strands …
MS Anglesio, Y Wang, W Yang, J Senz… - The Journal of …, 2013 - Wiley Online Library
Our group recently described recurrent somatic mutations of the miRNA processing gene
DICER1 in non‐epithelial ovarian cancer. Mutations appeared to be clustered around each …
DICER1 in non‐epithelial ovarian cancer. Mutations appeared to be clustered around each …
Cross-regulation between an alternative splicing activator and a transcription repressor controls neurogenesis
B Raj, D O'Hanlon, JP Vessey, Q Pan, D Ray… - Molecular cell, 2011 - cell.com
Neurogenesis requires the concerted action of numerous genes that are regulated at
multiple levels. However, how different layers of gene regulation are coordinated to promote …
multiple levels. However, how different layers of gene regulation are coordinated to promote …
A feed forward loop enforces YAP/TAZ signaling during tumorigenesis
MK Gill, T Christova, YY Zhang, A Gregorieff… - Nature …, 2018 - nature.com
In most solid tumors, the Hippo pathway is inactivated through poorly understood
mechanisms that result in the activation of the transcriptional regulators, YAP and TAZ. Here …
mechanisms that result in the activation of the transcriptional regulators, YAP and TAZ. Here …