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Synthetic biology to access and expand nature's chemical diversity
Bacterial genomes encode the biosynthetic potential to produce hundreds of thousands of
complex molecules with diverse applications, from medicine to agriculture and materials …
complex molecules with diverse applications, from medicine to agriculture and materials …
Navigating environmental transitions: the role of phenotypic variation in bacterial responses
The ability of bacteria to respond to changes in their environment is critical to their survival,
allowing them to withstand stress, form complex communities, and induce virulence …
allowing them to withstand stress, form complex communities, and induce virulence …
Genetic programs constructed from layered logic gates in single cells
Genetic programs function to integrate environmental sensors, implement signal processing
algorithms and control expression dynamics. These programs consist of integrated genetic …
algorithms and control expression dynamics. These programs consist of integrated genetic …
Refactoring the nitrogen fixation gene cluster from Klebsiella oxytoca
Bacterial genes associated with a single trait are often grouped in a contiguous unit of the
genome known as a gene cluster. It is difficult to genetically manipulate many gene clusters …
genome known as a gene cluster. It is difficult to genetically manipulate many gene clusters …
Characterizing bacterial gene circuit dynamics with optically programmed gene expression signals
Gene circuits are dynamical systems that regulate cellular behaviors, often using protein
signals as inputs and outputs. Here we have developed an optogenetic'function …
signals as inputs and outputs. Here we have developed an optogenetic'function …
The Cost of Virulence: Retarded Growth of Salmonella Typhimurium Cells Expressing Type III Secretion System 1
Virulence factors generally enhance a pathogen's fitness and thereby foster transmission.
However, most studies of pathogen fitness have been performed by averaging the …
However, most studies of pathogen fitness have been performed by averaging the …
Setting the standard in synthetic biology
A Arkin - Nature biotechnology, 2008 - nature.com
Setting the standard in synthetic biology | Nature Biotechnology Skip to main content Thank you
for visiting nature.com. You are using a browser version with limited support for CSS. To obtain …
for visiting nature.com. You are using a browser version with limited support for CSS. To obtain …
Engineering the Salmonella type III secretion system to export spider silk monomers
DM Widmaier, D Tullman‐Ercek, EA Mirsky… - Molecular systems …, 2009 - embopress.org
The type III secretion system (T3SS) exports proteins from the cytoplasm, through both the
inner and outer membranes, to the external environment. Here, a system is constructed to …
inner and outer membranes, to the external environment. Here, a system is constructed to …
The incoherent feed‐forward loop can generate non‐monotonic input functions for genes
S Kaplan, A Bren, E Dekel, U Alon - Molecular systems biology, 2008 - embopress.org
Gene regulation networks contain recurring circuit patterns called network motifs. One of the
most common network motif is the incoherent type 1 feed‐forward loop (I1‐FFL), in which an …
most common network motif is the incoherent type 1 feed‐forward loop (I1‐FFL), in which an …
Induction of Salmonella pathogenicity island 1 under different growth conditions can affect Salmonella–host cell interactions in vitro
Salmonella invade non-phagocytic cells by inducing massive actin rearrangements,
resulting in membrane ruffle formation and phagocytosis of the bacteria. This process is …
resulting in membrane ruffle formation and phagocytosis of the bacteria. This process is …