Understanding cell‐cell communication and signaling in the colorectal cancer microenvironment

S AlMusawi, M Ahmed, AS Nateri - Clinical and translational …, 2021 - Wiley Online Library
Carcinomas are complex heterocellular systems containing epithelial cancer cells, stromal
fibroblasts, and multiple immune cell‐types. Cell‐cell communication between these tumor …

The computational capabilities of many-to-many protein interaction networks

HE Klumpe, J Garcia-Ojalvo, MB Elowitz, YE Antebi - Cell Systems, 2023 - cell.com
Many biological circuits comprise sets of protein variants that interact with one another in a
many-to-many, or promiscuous, fashion. These architectures can provide powerful …

Inferring microenvironmental regulation of gene expression from single-cell RNA sequencing data using scMLnet with an application to COVID-19

J Cheng, J Zhang, Z Wu, X Sun - Briefings in bioinformatics, 2021 - academic.oup.com
Inferring how gene expression in a cell is influenced by cellular microenvironment is of great
importance yet challenging. In this study, we present a single-cell RNA-sequencing data …

Lanatoside C induces G2/M cell cycle arrest and suppresses cancer cell growth by attenuating MAPK, Wnt, JAK-STAT, and PI3K/AKT/mTOR signaling pathways

D Reddy, R Kumavath, P Ghosh, D Barh - Biomolecules, 2019 - mdpi.com
Cardiac glycosides (CGs) are a diverse family of naturally derived compounds having a
steroid and glycone moiety in their structures. CG molecules inhibit the α-subunit of …

Computational analyses of mechanism of action (MoA): data, methods and integration

MA Trapotsi, L Hosseini-Gerami, A Bender - RSC chemical biology, 2022 - pubs.rsc.org
The elucidation of a compound's Mechanism of Action (MoA) is a challenging task in the
drug discovery process, but it is important in order to rationalise phenotypic findings and to …

The Aedes aegypti siRNA pathway mediates broad-spectrum defense against human pathogenic viruses and modulates antibacterial and antifungal defenses

Y Dong, S Dong, NB Dizaji, N Rutkowski… - PLoS …, 2022 - journals.plos.org
The mosquito's innate immune system defends against a variety of pathogens, and the
conserved siRNA pathway plays a central role in the control of viral infections. Here, we …

Functions and molecular mechanisms of deltex family ubiquitin E3 ligases in development and disease

L Wang, X Sun, J He, Z Liu - Frontiers in cell and developmental …, 2021 - frontiersin.org
Ubiquitination is a posttranslational modification of proteins that significantly affects protein
stability and function. The specificity of substrate recognition is determined by ubiquitin E3 …

[HTML][HTML] Novel doxorubicin/folate-targeted trans-ferulic acid-loaded PLGA nanoparticles combination: In-vivo superiority over standard chemotherapeutic regimen for …

SA Helmy, S El-Mofty, AM El Gayar… - Biomedicine & …, 2022 - Elsevier
Abstract Aim Doxorubicin/Cyclophosphamide (AC) is one of the standard adjuvant
anthracycline-containing regimens that is still in use for breast cancer treatment. Cancer cell …

Single-cell transcriptome-based multilayer network biomarker for predicting prognosis and therapeutic response of gliomas

J Zhang, M Guan, Q Wang, J Zhang… - Briefings in …, 2020 - academic.oup.com
Occurrence and development of cancers are governed by complex networks of interacting
intercellular and intracellular signals. The technology of single-cell RNA sequencing (scRNA …

[HTML][HTML] Fundaments of the honey bee (Apis mellifera) immune system. Review

A Larsen, FJ Reynaldi… - Revista mexicana de …, 2019 - scielo.org.mx
Honey bees (Apis mellifera) pollinate plants in both natural and managed ecosystems,
contributing to food production and sustaining and increasing biodiversity. Unfortunately bee …