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Genetic basis for congenital heart disease: revisited: a scientific statement from the American Heart Association
This review provides an updated summary of the state of our knowledge of the genetic
contributions to the pathogenesis of congenital heart disease. Since 2007, when the initial …
contributions to the pathogenesis of congenital heart disease. Since 2007, when the initial …
A review of deep learning applications in human genomics using next-generation sequencing data
WS Alharbi, M Rashid - Human Genomics, 2022 - Springer
Genomics is advancing towards data-driven science. Through the advent of high-throughput
data generating technologies in human genomics, we are overwhelmed with the heap of …
data generating technologies in human genomics, we are overwhelmed with the heap of …
Curated variation benchmarks for challenging medically relevant autosomal genes
J Wagner, ND Olson, L Harris, J McDaniel… - Nature …, 2022 - nature.com
The repetitive nature and complexity of some medically relevant genes poses a challenge
for their accurate analysis in a clinical setting. The Genome in a Bottle Consortium has …
for their accurate analysis in a clinical setting. The Genome in a Bottle Consortium has …
A universal SNP and small-indel variant caller using deep neural networks
Despite rapid advances in sequencing technologies, accurately calling genetic variants
present in an individual genome from billions of short, errorful sequence reads remains …
present in an individual genome from billions of short, errorful sequence reads remains …
Towards precision medicine
EA Ashley - Nature Reviews Genetics, 2016 - nature.com
There is great potential for genome sequencing to enhance patient care through improved
diagnostic sensitivity and more precise therapeutic targeting. To maximize this potential …
diagnostic sensitivity and more precise therapeutic targeting. To maximize this potential …
The role of exome sequencing in newborn screening for inborn errors of metabolism
Public health newborn screening (NBS) programs provide population-scale ascertainment
of rare, treatable conditions that require urgent intervention. Tandem mass spectrometry …
of rare, treatable conditions that require urgent intervention. Tandem mass spectrometry …
Deep sequencing of 10,000 human genomes
We report on the sequencing of 10,545 human genomes at 30×–40× coverage with an
emphasis on quality metrics and novel variant and sequence discovery. We find that 84% of …
emphasis on quality metrics and novel variant and sequence discovery. We find that 84% of …
A reference data set of 5.4 million phased human variants validated by genetic inheritance from sequencing a three-generation 17-member pedigree
Improvement of variant calling in next-generation sequence data requires a comprehensive,
genome-wide catalog of high-confidence variants called in a set of genomes for use as a …
genome-wide catalog of high-confidence variants called in a set of genomes for use as a …
Long-read genome sequencing identifies causal structural variation in a Mendelian disease
JD Merker, AM Wenger, T Sneddon, M Grove… - Genetics in …, 2018 - nature.com
Purpose Current clinical genomics assays primarily utilize short-read sequencing (SRS), but
SRS has limited ability to evaluate repetitive regions and structural variants. Long-read …
SRS has limited ability to evaluate repetitive regions and structural variants. Long-read …
Precision medicine in cardiology
EM Antman, J Loscalzo - Nature Reviews Cardiology, 2016 - nature.com
The cardiovascular research and clinical communities are ideally positioned to address the
epidemic of noncommunicable causes of death, as well as advance our understanding of …
epidemic of noncommunicable causes of death, as well as advance our understanding of …