Recent advances in machine learning-based models for prediction of antiviral peptides

F Ali, H Kumar, W Alghamdi, FA Kateb… - Archives of Computational …, 2023 - Springer
Viruses have killed and infected millions of people across the world. It causes several
chronic diseases like COVID-19, HIV, and hepatitis. To cope with such diseases and virus …

AIPs-SnTCN: Predicting anti-inflammatory peptides using fastText and transformer encoder-based hybrid word embedding with self-normalized temporal …

A Raza, J Uddin, A Almuhaimeed, S Akbar… - Journal of chemical …, 2023 - ACS Publications
Inflammation is a biologically resistant response to harmful stimuli, such as infection,
damaged cells, toxic chemicals, or tissue injuries. Its purpose is to eradicate pathogenic …

ToxinPred 3.0: An improved method for predicting the toxicity of peptides

AS Rathore, S Choudhury, A Arora, P Tijare… - Computers in Biology …, 2024 - Elsevier
Toxicity emerges as a prominent challenge in the design of therapeutic peptides, causing
the failure of numerous peptides during clinical trials. In 2013, our group developed …

cACP-DeepGram: classification of anticancer peptides via deep neural network and skip-gram-based word embedding model

S Akbar, M Hayat, M Tahir, S Khan, FK Alarfaj - Artificial intelligence in …, 2022 - Elsevier
Cancer is a Toxic health concern worldwide, it happens when cellular modifications cause
the irregular growth and division of human cells. Several traditional approaches such as …

Optimizing gene selection and cancer classification with hybrid sine cosine and cuckoo search algorithm

A Yaqoob, NK Verma, RM Aziz - Journal of medical systems, 2024 - Springer
Gene expression datasets offer a wide range of information about various biological
processes. However, it is difficult to find the important genes among the high-dimensional …

PAtbP-EnC: Identifying anti-tubercular peptides using multi-feature representation and genetic algorithm-based deep ensemble model

S Akbar, A Raza, T Al Shloul, A Ahmad, A Saeed… - IEEE …, 2023 - ieeexplore.ieee.org
Mycobacterium tuberculosis, a highly perilous pathogen in humans, serves as the causative
agent of tuberculosis (TB), affecting nearly 33% of the global population. With the increasing …

iAFPs-EnC-GA: identifying antifungal peptides using sequential and evolutionary descriptors based multi-information fusion and ensemble learning approach

A Ahmad, S Akbar, M Tahir, M Hayat, F Ali - Chemometrics and Intelligent …, 2022 - Elsevier
Fungal infections have become a serious health concern for human beings worldwide.
Fungal infections usually occur when the invading fungus appear on a particular part of the …

iAtbP-Hyb-EnC: Prediction of antitubercular peptides via heterogeneous feature representation and genetic algorithm based ensemble learning model

S Akbar, A Ahmad, M Hayat, AU Rehman… - Computers in Biology …, 2021 - Elsevier
Tuberculosis (TB) is a worldwide illness caused by the bacteria Mycobacterium tuberculosis.
Owing to the high prevalence of multidrug-resistant tuberculosis, numerous traditional …

AFP-CMBPred: Computational identification of antifreeze proteins by extending consensus sequences into multi-blocks evolutionary information

F Ali, S Akbar, A Ghulam, ZA Maher, A Unar… - Computers in Biology …, 2021 - Elsevier
In extremely cold environments, living organisms like plants, animals, fishes, and microbes
can die due to the intracellular ice formation in their bodies. To sustain life in such cold …

Raman spectroscopy and AI applications in cancer grading. An overview

PM Conforti, G Lazzini, P Russo, M D'Acunto - IEEE Access, 2024 - ieeexplore.ieee.org
Raman spectroscopy (RS) is a label-free molecular vibrational spectroscopy technique that
is able to identify the molecular fingerprint of various samples making use of the inelastic …