VHH Structural Modelling Approaches: A Critical Review
P Vishwakarma, AM Vattekatte, N Shinada… - International Journal of …, 2022 - mdpi.com
VHH, ie, VH domains of camelid single-chain antibodies, are very promising therapeutic
agents due to their significant physicochemical advantages compared to classical …
agents due to their significant physicochemical advantages compared to classical …
ATLAS: protein flexibility description from atomistic molecular dynamics simulations
Dynamical behaviour is one of the most crucial protein characteristics. Despite the advances
in the field of protein structure resolution and prediction, analysis and prediction of protein …
in the field of protein structure resolution and prediction, analysis and prediction of protein …
Discrete analysis of camelid variable domains: Sequences, structures, and in-silico structure prediction
Antigen binding by antibodies requires precise orientation of the complementarity-
determining region (CDR) loops in the variable domain to establish the correct contact …
determining region (CDR) loops in the variable domain to establish the correct contact …
The LILI motif of M3-S2 linkers is a component of the NMDA receptor channel gate
M Ladislav, J Cerny, J Krusek, M Horak… - Frontiers in molecular …, 2018 - frontiersin.org
N-methyl-D-aspartate receptors (NMDARs) mediate excitatory synaptic transmission in the
central nervous system, underlie the induction of synaptic plasticity, and their malfunction is …
central nervous system, underlie the induction of synaptic plasticity, and their malfunction is …
Quality assessment of VHH models
AA Nadaradjane, J Diharce, J Rebehmed… - Journal of …, 2023 - Taylor & Francis
Abstract Heavy Chain Only Antibodies are specific to Camelid species. Despite the lack of
the light chain variable domain, their heavy chain variable domain (VH) domain, named …
the light chain variable domain, their heavy chain variable domain (VH) domain, named …
Discrete analyses of protein dynamics
Protein structures are highly dynamic macromolecules. This dynamics is often analysed
through experimental and/or computational methods only for an isolated or a limited number …
through experimental and/or computational methods only for an isolated or a limited number …
Investigation of the impact of PTMs on the protein backbone conformation
Post-translational modifications (PTMs) are known to play a critical role in the regulation of
protein functions. Their impact on protein structures and their link to disorder regions have …
protein functions. Their impact on protein structures and their link to disorder regions have …
iPBAvizu: a PyMOL plugin for an efficient 3D protein structure superimposition approach
Background Protein 3D structure is the support of its function. Comparison of 3D protein
structures provides insight on their evolution and their functional specificities and can be …
structures provides insight on their evolution and their functional specificities and can be …
Structural and dynamic differences between calreticulin mutants associated with essential thrombocythemia
R Radjasandirane, AG de Brevern - Biomolecules, 2023 - mdpi.com
Essential thrombocythemia (ET) is a blood cancer. ET is characterized by an overproduction
of platelets that can lead to thrombosis formation. Platelet overproduction occurs in …
of platelets that can lead to thrombosis formation. Platelet overproduction occurs in …
A structural entropy index to analyse local conformations in intrinsically disordered proteins
Sequence–structure–function paradigm has been revolutionized by the discovery of
disordered regions and disordered proteins more than two decades ago. While the definition …
disordered regions and disordered proteins more than two decades ago. While the definition …