Software for systems biology: from tools to integrated platforms
Understanding complex biological systems requires extensive support from software tools.
Such tools are needed at each step of a systems biology computational workflow, which …
Such tools are needed at each step of a systems biology computational workflow, which …
Comparison of human cell signaling pathway databases—evolution, drawbacks and challenges
Elucidating the complexities of cell signaling pathways is of immense importance to gain
understanding about various biological phenomenon, such as dynamics of gene/protein …
understanding about various biological phenomenon, such as dynamics of gene/protein …
XPath: looking forward
The location path language XPath is of particular importance for XML applications since it is
a core component of many XML processing standards such as XSLT or XQuery. In this …
a core component of many XML processing standards such as XSLT or XQuery. In this …
BioThesaurus: a web-based thesaurus of protein and gene names
BioThesaurus is a web-based system designed to map a comprehensive collection of
protein and gene names to protein entries in the UniProt Knowledgebase. Currently …
protein and gene names to protein entries in the UniProt Knowledgebase. Currently …
Systematic metabolic pathway analysis of selective hydrolytic strains for anaerobic fermentation of food waste and identification of molecular markers during stress …
M Bhardwaj, NR Ram, GN Nikhil - Materials Today: Proceedings, 2024 - Elsevier
Food waste (FW) disposal has become a global social, environmental, and economic
problem. Anaerobic digestion (AD) is a promising option to manage FW, and hydrolysis is an …
problem. Anaerobic digestion (AD) is a promising option to manage FW, and hydrolysis is an …
Xcerpt: A rule-based query and transformation language for the Web
FS Schaffert - 2004 - edoc.ub.uni-muenchen.de
This thesis investigates querying the Web and the Semantic Web. It proposes a new
rulebased query language called Xcerpt. Xcerpt differs from other query languages in that it …
rulebased query language called Xcerpt. Xcerpt differs from other query languages in that it …
Processing first-order queries under limited access patterns
A Nash, B Ludäscher - Proceedings of the twenty-third ACM SIGMOD …, 2004 - dl.acm.org
We study the problem of answering queries over sources with limited access patterns. Given
a first-order query Q, the problem is to decide whether there is an equivalent query which …
a first-order query Q, the problem is to decide whether there is an equivalent query which …
Integration of life science databases
J Köhler - Drug Discovery Today: BIOSILICO, 2004 - Elsevier
More than 500 biological databases exist at present. Searching and integrating data from
various sources is often a prerequisite for research in the field of molecular biology and …
various sources is often a prerequisite for research in the field of molecular biology and …
QMatch–Using paths to match XML schemas
N Tansalarak, KT Claypool - Data & Knowledge Engineering, 2007 - Elsevier
Integration of multiple heterogeneous data sources continues to be a critical problem for
many application domains and a challenge for researchers world-wide. With the increasing …
many application domains and a challenge for researchers world-wide. With the increasing …
Characterising nested database dependencies by fragments of propositional logic
We extend the earlier results on the equivalence between the Boolean and the multivalued
dependencies in relational databases and fragments of the Boolean propositional logic. It is …
dependencies in relational databases and fragments of the Boolean propositional logic. It is …