RNA-Seq: a revolutionary tool for transcriptomics

Z Wang, M Gerstein, M Snyder - Nature reviews genetics, 2009 - nature.com
RNA-Seq is a recently developed approach to transcriptome profiling that uses deep-
sequencing technologies. Studies using this method have already altered our view of the …

Applications of next generation sequencing in molecular ecology of non-model organisms

R Ekblom, J Galindo - Heredity, 2011 - nature.com
As most biologists are probably aware, technological advances in molecular biology during
the last few years have opened up possibilities to rapidly generate large-scale sequencing …

[BOOK][B] Ecological speciation

P Nosil - 2012 - books.google.com
The origin of biological diversity, via the formation of new species, can be inextricably linked
to adaptation to the ecological environment. Specifically, ecological processes are central to …

[PDF][PDF] Applications of next-generation sequencing technologies in functional genomics

O Morozova, MA Marra - Genomics, 2008 - core.ac.uk
Applications of next-generation sequencing technologies in functional genomics Page 1
Review Applications of next-generation sequencing technologies in functional genomics Olena …

PLEK: a tool for predicting long non-coding RNAs and messenger RNAs based on an improved k-mer scheme

A Li, J Zhang, Z Zhou - BMC bioinformatics, 2014 - Springer
Background High-throughput transcriptome sequencing (RNA-seq) technology promises to
discover novel protein-coding and non-coding transcripts, particularly the identification of …

Next-generation sequencing technologies and their implications for crop genetics and breeding

RK Varshney, SN Nayak, GD May, SA Jackson - Trends in biotechnology, 2009 - cell.com
Using next-generation sequencing technologies it is possible to resequence entire plant
genomes or sample entire transcriptomes more efficiently and economically and in greater …

Phylogeography's past, present, and future: 10 years after

MJ Hickerson, BC Carstens, J Cavender-Bares… - Molecular phylogenetics …, 2010 - Elsevier
Approximately 20 years ago, Avise and colleagues proposed the integration of
phylogenetics and population genetics for investigating the connection between micro-and …

RNA-seq: from technology to biology

S Marguerat, J Bähler - Cellular and molecular life sciences, 2010 - Springer
Next-generation sequencing technologies are now being exploited not only to analyse static
genomes, but also dynamic transcriptomes in an approach termed RNA-seq. Although these …

Challenges and opportunities of genetic approaches to biological conservation

R Frankham - Biological conservation, 2010 - Elsevier
I discuss future challenges and opportunities in genetic approaches to biodiversity
conservation. Resolving taxonomy uncertainties and identifying diverged evolutionary units …

Applications of new sequencing technologies for transcriptome analysis

O Morozova, M Hirst, MA Marra - Annual review of genomics …, 2009 - annualreviews.org
Transcriptome analysis has been a key area of biological inquiry for decades. Over the
years, research in the field has progressed from candidate gene-based detection of RNAs …