New developments in RiPP discovery, enzymology and engineering

M Montalbán-López, TA Scott, S Ramesh… - Natural product …, 2021 - pubs.rsc.org
Covering: up to June 2020 Ribosomally-synthesized and post-translationally modified
peptides (RiPPs) are a large group of natural products. A community-driven review in 2013 …

Noncanonical amino acids in biocatalysis

Z Birch-Price, FJ Hardy, TM Lister, AR Kohn… - Chemical …, 2024 - ACS Publications
In recent years, powerful genetic code reprogramming methods have emerged that allow
new functional components to be embedded into proteins as noncanonical amino acid …

Expanding and reprogramming the genetic code

JW Chin - Nature, 2017 - nature.com
Nature uses a limited, conservative set of amino acids to synthesize proteins. The ability to
genetically encode an expanded set of building blocks with new chemical and physical …

Total synthesis of Escherichia coli with a recoded genome

J Fredens, K Wang, D de la Torre, LFH Funke… - Nature, 2019 - nature.com
Nature uses 64 codons to encode the synthesis of proteins from the genome, and chooses 1
sense codon—out of up to 6 synonyms—to encode each amino acid. Synonymous codon …

Design and synthesis of a minimal bacterial genome

CA Hutchison III, RY Chuang, VN Noskov… - Science, 2016 - science.org
INTRODUCTION In 1984, the simplest cells capable of autonomous growth, the
mycoplasmas, were proposed as models for understanding the basic principles of life. In …

Reprogramming the genetic code

D de la Torre, JW Chin - Nature Reviews Genetics, 2021 - nature.com
The encoded biosynthesis of proteins provides the ultimate paradigm for high-fidelity
synthesis of long polymers of defined sequence and composition, but it is limited to …

Evolution of pyrrolysyl-tRNA synthetase: From methanogenesis to genetic code expansion

NG Koch, N Budisa - Chemical Reviews, 2024 - ACS Publications
Over 20 years ago, the pyrrolysine encoding translation system was discovered in specific
archaea. Our Review provides an overview of how the once obscure pyrrolysyl-tRNA …

The second decade of synthetic biology: 2010–2020

F Meng, T Ellis - Nature Communications, 2020 - nature.com
The second decade of synthetic biology: 2010–2020 | Nature Communications Skip to main
content Thank you for visiting nature.com. You are using a browser version with limited support …

Hydrogel-based biocontainment of bacteria for continuous sensing and computation

TC Tang, E Tham, X Liu, K Yehl, AJ Rovner… - Nature Chemical …, 2021 - nature.com
Genetically modified microorganisms (GMMs) can enable a wide range of important
applications including environmental sensing and responsive engineered living materials …

Sense codon reassignment enables viral resistance and encoded polymer synthesis

WE Robertson, LFH Funke, D de la Torre, J Fredens… - Science, 2021 - science.org
It is widely hypothesized that removing cellular transfer RNAs (tRNAs)—making their
cognate codons unreadable—might create a genetic firewall to viral infection and enable …