[HTML][HTML] Interactome networks and human disease

M Vidal, ME Cusick, AL Barabási - Cell, 2011 - cell.com
Complex biological systems and cellular networks may underlie most genotype to
phenotype relationships. Here, we review basic concepts in network biology, discussing …

Network medicine in the age of biomedical big data

AR Sonawane, ST Weiss, K Glass, A Sharma - Frontiers in Genetics, 2019 - frontiersin.org
Network medicine is an emerging area of research dealing with molecular and genetic
interactions, network biomarkers of disease, and therapeutic target discovery. Large-scale …

Transcriptional regulation of nitrogen-associated metabolism and growth

A Gaudinier, J Rodriguez-Medina, L Zhang, A Olson… - Nature, 2018 - nature.com
Nitrogen is an essential macronutrient for plant growth and basic metabolic processes. The
application of nitrogen-containing fertilizer increases yield, which has been a substantial …

Mutation of a bHLH transcription factor allowed almond domestication

R Sánchez-Pérez, S Pavan, R Mazzeo, C Moldovan… - Science, 2019 - science.org
Wild almond species accumulate the bitter and toxic cyanogenic diglucoside amygdalin.
Almond domestication was enabled by the selection of genotypes harboring sweet kernels …

Gene regulatory networks and the role of robustness and stochasticity in the control of gene expression

LT MacNeil, AJM Walhout - Genome research, 2011 - genome.cshlp.org
In any given cell, thousands of genes are expressed and work in concert to ensure the cell's
function, fitness, and survival. Each gene, in turn, must be expressed at the proper time and …

Map** methyl jasmonate-mediated transcriptional reprogramming of metabolism and cell cycle progression in cultured Arabidopsis cells

L Pauwels, K Morreel, E De Witte… - Proceedings of the …, 2008 - National Acad Sciences
Jasmonates (JAs) are plant-specific signaling molecules that steer a diverse set of
physiological and developmental processes. Pathogen attack and wounding inflicted by …

MXL-3 and HLH-30 transcriptionally link lipolysis and autophagy to nutrient availability

EJ O'Rourke, G Ruvkun - Nature cell biology, 2013 - nature.com
Fat is stored or mobilized according to food availability. Malfunction of the mechanisms that
ensure this coordination underlie metabolic diseases in humans. In mammals, lysosomal …

Gateway® recombinational cloning: a biological operating system

F Katzen - Expert opinion on drug discovery, 2007 - Taylor & Francis
The Gateway® cloning system sets a new trend in molecular biology by addressing the
difficulties of adaptability, efficiency and compatibility of the traditional cloning approaches …

Gateway compatible vectors for analysis of gene function in the zebrafish

JA Villefranc, J Amigo… - … dynamics: an official …, 2007 - Wiley Online Library
The recent establishment of recombination‐based cloning systems has greatly facilitated the
analysis of gene function by allowing rapid and high‐efficiency generation of plasmid …

Next-generation sequencing to generate interactome datasets

H Yu, L Tardivo, S Tam, E Weiner, F Gebreab, C Fan… - Nature …, 2011 - nature.com
Next-generation sequencing has not been applied to protein-protein interactome network
map** so far because the association between the members of each interacting pair …