Plant genome resequencing and population genomics: Current status and future prospects

B Song, W Ning, D Wei, M Jiang, K Zhu, X Wang… - Molecular Plant, 2023 - cell.com
Advances in DNA sequencing technology have sparked a genomics revolution, driving
breakthroughs in plant genetics and crop breeding. Recently, the focus has shifted from …

Vegetable biology and breeding in the genomics era

H Li, X Yang, Y Shang, Z Zhang, S Huang - Science China Life Sciences, 2023 - Springer
Vegetable crops provide a rich source of essential nutrients for humanity and represent
critical economic values to global rural societies. However, genetic studies of vegetable …

Genome assembly and resequencing analyses provide new insights into the evolution, domestication and ornamental traits of crape myrtle

Y Zhou, T Zheng, M Cai, L Feng, X Chi… - Horticulture …, 2023 - academic.oup.com
Crape myrtle (Lagerstroemia indica) is a globally used ornamental woody plant and is the
representative species of Lagerstroemia. However, studies on the evolution and genomic …

Diversity in recombination hotspot characteristics and gene structure shape fine-scale recombination patterns in plant genomes

T Brazier, S Glémin - Molecular biology and evolution, 2024 - academic.oup.com
During the meiosis of many eukaryote species, crossovers tend to occur within narrow
regions called recombination hotspots. In plants, it is generally thought that gene regulatory …

Unlocking saponin biosynthesis in soapwort

S Jo, A El-Demerdash, C Owen, V Srivastava… - Nature Chemical …, 2024 - nature.com
Soapwort (Saponaria officinalis) is a flowering plant from the Caryophyllaceae family with a
long history of human use as a traditional source of soap. Its detergent properties are …

Evolution of the spinach sex-linked region within a rarely recombining pericentromeric region

H She, Z Liu, S Li, Z Xu, H Zhang, F Cheng… - Plant …, 2023 - academic.oup.com
Sex chromosomes have evolved independently in many different plant lineages. Here, we
describe reference genomes for spinach (Spinacia oleracea) X and Y haplotypes by …

A high-quality Bougainvillea genome provides new insights into evolutionary history and pigment biosynthetic pathways in the Caryophyllales

L Lan, H Zhao, S Xu, S Kan, X Zhang, W Liu… - Horticulture …, 2023 - academic.oup.com
Bougainvillea is a perennial ornamental shrub that is highly regarded in ornamental
horticulture around the world. However, the absence of genome data limits our …

A rapid method for assembly of single chromosome and identification of sex determination region based on single‐chromosome sequencing

N Li, J Zhou, W Zhang, W Liu, B Wang, H She… - New …, 2023 - Wiley Online Library
The sex‐determining‐region (SDR) may offer the best prospects for studying sex‐
determining gene, recombination suppression, and chromosome heteromorphism …

Chromosome-scale Amaranthus tricolor genome provides insights into the evolution of the genus Amaranthus and the mechanism of betalain biosynthesis

H Wang, D Xu, S Wang, A Wang, L Lei, F Jiang… - DNA …, 2023 - academic.oup.com
Amaranthus tricolor is a vegetable and ornamental amaranth, with high lysine, dietary fibre
and squalene content. The red cultivar of A. tricolor possesses a high concentration of …

Transcriptome-guided selection of stable reference genes for expression analysis in spinach

A Soorni, M Rezvani, H Bigdeli - Scientific Reports, 2024 - nature.com
Accurate measurement of gene expression levels is vital for advancing plant biology
research. This study explores the identification and validation of stable reference genes …