Due to the ability to regulate target metabolic pathways globally and dynamically, metabolic
regulation systems composed of transcription factors have been widely used in metabolic …

Dissimilatory sulphate reduction is the unifying and defining trait of sulphate-reducing
prokaryotes (SRP). In their predominant habitats, sulphate-rich marine sediments, SRP have …

RegulonDB is a database that contains the most comprehensive corpus of knowledge of the
regulation of transcription initiation of Escherichia coli K-12, including data from both …

Networks are vital tools for understanding and modeling interactions in complex systems in
science and engineering, and direct and indirect interactions are pervasive in all types of …

INTRODUCTION There is a dimension to postnatal human development that involves
assembly of microbial communities in different body habitats, including the gut. Children with …

Cheese fermentation and flavour formation are the result of complex biochemical reactions
driven by the activity of multiple microorganisms. Here, we studied the roles of microbial …

INTRODUCTION As we come to appreciate how our microbial communities (microbiota)
assemble following birth, there is an opportunity to determine how this facet of our …

Although RNA-seq is a powerful tool, the considerable time and cost associated with library
construction has limited its utilization for various applications. RNAtag-Seq, an approach to …

The human gut microbiome harbors a diverse array of metabolic pathways contributing to its
development and homeostasis via a complex web of diet-dependent metabolic interactions …

Living organisms have evolved a plethora of sensing systems for the intra-and extracellular
detection of small molecules, ions or physical parameters. Several recent studies have …