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Missing genes in metabolic pathways: a comparative genomics approach
A Osterman, R Overbeek - Current opinion in chemical biology, 2003 - Elsevier
The new techniques of genome context analysis—chromosomal gene clustering, protein
fusions, occurrence profiles and shared regulatory sites—infer functional coupling between …
fusions, occurrence profiles and shared regulatory sites—infer functional coupling between …
Practical and theoretical advances in predicting the function of a protein by its phylogenetic distribution
The gap between the amount of genome information released by genome sequencing
projects and our knowledge about the proteins' functions is rapidly increasing. To fill this …
projects and our knowledge about the proteins' functions is rapidly increasing. To fill this …
Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima
Metabolic pathways have traditionally been described in terms of biochemical reactions and
metabolites. With the use of structural genomics and systems biology, we generated a three …
metabolites. With the use of structural genomics and systems biology, we generated a three …
Mycobacterium tuberculosis thymidylate synthase gene thyX is essential and potentially bifunctional, while thyA deletion confers resistance to p-aminosalicylic acid
AS Fivian-Hughes, J Houghton, EO Davis - Microbiology, 2012 - microbiologyresearch.org
Thymidylate synthase (TS) enzymes catalyse the biosynthesis of deoxythymidine
monophosphate (dTMP or thymidylate), and so are important for DNA replication and repair …
monophosphate (dTMP or thymidylate), and so are important for DNA replication and repair …
Sulfolobus tengchongensis Spindle-Shaped Virus STSV1: Virus-Host Interactions and Genomic Features
X **ang, L Chen, X Huang, Y Luo, Q She… - Journal of …, 2005 - journals.asm.org
ABSTRACT A virus infecting the hyperthermophilic archaeon Sulfolobus tengchongensis
has been isolated from a field sample from Tengchong, China, and characterized. The virus …
has been isolated from a field sample from Tengchong, China, and characterized. The virus …
Functionally comparable but evolutionarily distinct nucleotide-targeting effectors help identify conserved paradigms across diverse immune systems
While nucleic acid-targeting effectors are known to be central to biological conflicts and anti-
selfish element immunity, recent findings have revealed immune effectors that target their …
selfish element immunity, recent findings have revealed immune effectors that target their …
Life without dihydrofolate reductase FolA
H Myllykallio, D Leduc, J Filee, U Liebl - TRENDS in Microbiology, 2003 - cell.com
Reduced folate derivatives participate in numerous reactions of bacterial intermediary
metabolism. Consequently, the well-characterized enzyme implicated in the formation of …
metabolism. Consequently, the well-characterized enzyme implicated in the formation of …
Functional analysis of substrate and cofactor complex structures of a thymidylate synthase-complementing protein
II Mathews, AM Deacon, JM Canaves, D McMullan… - Structure, 2003 - cell.com
Like thymidylate synthase (TS) in eukaryotes, the thymidylate synthase-complementing
proteins (TSCPs) are mandatory for cell survival of many prokaryotes in the absence of …
proteins (TSCPs) are mandatory for cell survival of many prokaryotes in the absence of …
Functional analysis of FAD-dependent thymidylate synthase ThyX from Paramecium bursaria Chlorella virus-1
S Graziani, Y **a, JR Gurnon, JL Van Etten… - Journal of Biological …, 2004 - jbc.org
Sequence analysis of the 330-kb double-stranded DNA genome of Paramecium bursaria
chlorella virus-1 revealed an open reading frame A674R that encodes a protein with up to …
chlorella virus-1 revealed an open reading frame A674R that encodes a protein with up to …
Structure of the Mycobacterium tuberculosis flavin dependent thymidylate synthase (MtbThyX) at 2.0 Å resolution
P Sampathkumar, S Turley, JE Ulmer, HG Rhie… - Journal of molecular …, 2005 - Elsevier
A novel flavin-dependent thymidylate synthase was identified recently as an essential gene
in many archaebacteria and some pathogenic eubacteria. This enzyme, ThyX, is a potential …
in many archaebacteria and some pathogenic eubacteria. This enzyme, ThyX, is a potential …