Analysis of DNA methylation in cancer: location revisited

A Koch, SC Joosten, Z Feng, TC de Ruijter… - Nature reviews Clinical …, 2018 - nature.com
Abstract Changes in DNA methylation in cancer have been heralded as promising targets
for the development of powerful diagnostic, prognostic, and predictive biomarkers. Despite …

Two-step senescence-focused cancer therapies

CJ Sieben, I Sturmlechner, B van de Sluis… - Trends in cell …, 2018 - cell.com
Damaged cells at risk of neoplastic transformation can be neutralized by apoptosis or
engagement of the senescence program, which induces permanent cell-cycle arrest and a …

The role of DNA methylation in mammalian epigenetics

PA Jones, D Takai - Science, 2001 - science.org
Genes constitute only a small proportion of the total mammalian genome, and the precise
control of their expression in the presence of an overwhelming background of noncoding …

Cancer-epigenetics comes of age

PA Jones, PW Laird - Nature genetics, 1999 - nature.com
The discovery of numerous hypermethylated promoters of tumour–suppressor genes, along
with a better understanding of gene–silencing mechanisms, has moved DNA methylation …

Rethinking how DNA methylation patterns are maintained

PA Jones, G Liang - Nature Reviews Genetics, 2009 - nature.com
DNA methylation patterns are set up early in mammalian development and are then copied
during the division of somatic cells. A long-established model for the maintenance of these …

The human DNA methyltransferases (DNMTs) 1, 3a and 3b: coordinate mRNA expression in normal tissues and overexpression in tumors

KD Robertson, E Uzvolgyi, G Liang… - Nucleic acids …, 1999 - academic.oup.com
DNA methylation in mammals is required for embryonic development, X chromosome
inactivation and imprinting. Previous studies have shown that methylation patterns become …

The DNA methylation paradox

PA Jones - Trends in genetics, 1999 - cell.com
The methylation of CpG islands is often equated with transcriptional inactivity and there is
overwhelming evidence that this is the case for islands located in gene promoters. Such …

Urothelial tumorigenesis: a tale of divergent pathways

XR Wu - Nature Reviews Cancer, 2005 - nature.com
Urothelial carcinoma of the bladder is unique among epithelial carcinomas in its divergent
pathways of tumorigenesis. Low-grade papillary tumours rarely become muscle-invasive …

DNA methylation pattern changes upon long‐term culture and aging of human mesenchymal stromal cells

S Bork, S Pfister, H Witt, P Horn, B Korn, AD Ho… - Aging cell, 2010 - Wiley Online Library
Within 2–3 months of in vitro culture‐expansion, mesenchymal stromal cells (MSC) undergo
replicative senescence characterized by cell enlargement, loss of differentiation potential …

Distinct localization of histone H3 acetylation and H3-K4 methylation to the transcription start sites in the human genome

G Liang, JCY Lin, V Wei, C Yoo… - Proceedings of the …, 2004 - National Acad Sciences
Almost 1-2% of the human genome is located within 500 bp of either side of a transcription
initiation site, whereas a far larger proportion (≈ 25%) is potentially transcribable by …