Colloquium: Control of dynamics in brain networks

E Tang, DS Bassett - Reviews of modern physics, 2018 - APS
The ability to effectively control brain dynamics holds great promise for the enhancement of
cognitive function in humans and the betterment of their quality of life. Yet, successfully …

[HTML][HTML] Brain and cognitive reserve: Translation via network control theory

JD Medaglia, F Pasqualetti, RH Hamilton… - Neuroscience & …, 2017 - Elsevier
Traditional approaches to understanding the brain's resilience to neuropathology have
identified neurophysiological variables, often described as brain or cognitive “reserve,” …

[BOOK][B] Dynamics and Bifurcation in Networks: Theory and Applications of Coupled Differential Equations

M Golubitsky, I Stewart - 2023 - SIAM
The biologist JBS Haldane, when asked what we can learn about the Creator by examining
the world, is said to have replied “an inordinate fondness for beetles”[705]. Today's …

Dynamics and bifurcations in genetic circuits with fibration symmetries

I Stewart, SDS Reis, HA Makse - Journal of the Royal …, 2024 - royalsocietypublishing.org
Circuit building blocks of gene regulatory networks (GRN) have been identified through the
fibration symmetries of the underlying biological graph. Here, we analyse analytically six of …

Does the brain behave like a (complex) network? I. Dynamics

D Papo, JM Buldú - Physics of Life Reviews, 2023 - Elsevier
Graph theory is now becoming a standard tool in system-level neuroscience. However,
endowing observed brain anatomy and dynamics with a complex network structure does not …

Fibration symmetries uncover the building blocks of biological networks

F Morone, I Leifer, HA Makse - Proceedings of the National …, 2020 - National Acad Sciences
A major ambition of systems science is to uncover the building blocks of any biological
network to decipher how cellular function emerges from their interactions. Here, we …

Algebras of open dynamical systems on the operad of wiring diagrams

D Vagner, DI Spivak, E Lerman - arxiv preprint arxiv:1408.1598, 2014 - arxiv.org
In this paper, we use the language of operads to study open dynamical systems. More
specifically, we study the algebraic nature of assembling complex dynamical systems from …

Dynamical systems defined on simplicial complexes: Symmetries, conjugacies, and invariant subspaces

E Nijholt, L DeVille - Chaos: An Interdisciplinary Journal of Nonlinear …, 2022 - pubs.aip.org
We consider the general model for dynamical systems defined on a simplicial complex. We
describe the conjugacy classes of these systems and show how symmetries in a given …

The role of fibration symmetries in geometric deep learning

O Velarde, L Parra, P Boldi, H Makse - arxiv preprint arxiv:2408.15894, 2024 - arxiv.org
Geometric Deep Learning (GDL) unifies a broad class of machine learning techniques from
the perspectives of symmetries, offering a framework for introducing problem-specific …

[HTML][HTML] Graph fibrations and symmetries of network dynamics

E Nijholt, B Rink, J Sanders - Journal of Differential Equations, 2016 - Elsevier
Dynamical systems with a network structure can display remarkable phenomena such as
synchronisation and anomalous synchrony breaking. A methodology for classifying patterns …