DeepSeeded: Volumetric segmentation of dense cell populations with a cascade of deep neural networks in bacterial biofilm applications

TT Toma, Y Wang, A Gahlmann, ST Acton - Expert Systems with …, 2024 - Elsevier
Accurate and automatic segmentation of individual cell instances in microscopy images is a
vital step for quantifying the cellular attributes, which can subsequently lead to new …

Super resolution-based methodology for self-supervised segmentation of microscopy images

V Bommanapally, D Abeyrathna, P Chundi… - Frontiers in …, 2024 - frontiersin.org
Data-driven Artificial Intelligence (AI)/Machine learning (ML) image analysis approaches
have gained a lot of momentum in analyzing microscopy images in bioengineering …

Development of deep learning-based mobile application for the identification of Coccidia species in pigs using microscopic images

N Singh, V Mahore, M Das, S Kaur, S Basumatary… - Veterinary …, 2025 - Elsevier
Coccidiosis is a gastrointestinal parasitic disease caused by different species of Eimeria and
Isospora, poses a significant threat to pig farming, leading to substantial economic losses …

Machine Learning-Assisted Optical Detection of Multilayer Hexagonal Boron Nitride for Enhanced Characterization and Analysis

MHU Rahman, V Bommanapally… - 2023 IEEE …, 2023 - ieeexplore.ieee.org
Biofilms are ubiquitous in aqueous environments, exerting significant influence on diverse
surfaces, including metals prone to microbiologically influenced corrosion (MIC). This …

Accurate and fast extraction of adhesive cells based on concave points detection and matching

D Liang, YJ Pi, K Hu, YG Cui, Y Huang… - … Journal of Imaging …, 2024 - Wiley Online Library
Precise image segmentation of adhesive cells is a challenge during the cell detection
process for biomedical image analyses. In this article, a new segmentation and extraction …

Bacterial Image Segmentation through Deep Learning Approach

E Shakya, PC Huang - Machine Learning in 2D Materials Science, 2023 - taylorfrancis.com
For decades, advances in volume scanning electron microscopy (SEM) have contributed
significantly to increasing large, high-resolution three-dimensional (3D) images, and deep …

Gaussian model for closed curves

K Byrski, J Tabor, P Spurek - Expert Systems with Applications, 2024 - Elsevier
In the case of image processing or understanding, one of the common important tasks is to fit
closed curves (eg, circles, ellipses, etc.) to the underlying image. In higher-dimensional …

Machine Learning Approach to Estimate Volumetric Quantification of 2D SEM Images of Biofilms

D Abeyrathna, R Singh, S Badrloo… - 2024 IEEE …, 2024 - ieeexplore.ieee.org
Scanning Electron Microscopy (SEM) is one of the most important imaging techniques to
understand the dynamics of microscale objects. However, SEM images could mostly …

Label Efficient Learning for Multi-Label Classification With Self-Supervision

DLB Abeyrathna, G Mudiyanselage - 2024 - search.proquest.com
Deep neural networks, trained with supervised learning algorithms have demonstrated
remarkable performance in analyzing large, labeled datasets. However, obtaining sufficient …

Classification of the most common conditionally pathogenic microorganisms on SEM images with YOLO model

VN Gridin, IA Novikov, BR Salem… - 2023 IX International …, 2023 - ieeexplore.ieee.org
A relevant and highly demanded modern medicine problem in many of its areas is the timely
detection and recognition of pathogenic microorganisms and microbial communities in the …