An introduction to topological data analysis: fundamental and practical aspects for data scientists

F Chazal, B Michel - Frontiers in artificial intelligence, 2021 - frontiersin.org
With the recent explosion in the amount, the variety, and the dimensionality of available
data, identifying, extracting, and exploiting their underlying structure has become a problem …

[PDF][PDF] Statistical topological data analysis using persistence landscapes.

P Bubenik - J. Mach. Learn. Res., 2015 - jmlr.org
We define a new topological summary for data that we call the persistence landscape. Since
this summary lies in a vector space, it is easy to combine with tools from statistics and …

[KÖNYV][B] Statistical shape analysis: with applications in R

IL Dryden, KV Mardia - 2016 - books.google.com
A thoroughly revised and updated edition of this introduction to modern statistical methods
for shape analysis Shape analysis is an important tool in the many disciplines where objects …

Confidence sets for persistence diagrams

BT Fasy, F Lecci, A Rinaldo, L Wasserman… - 2014 - projecteuclid.org
Confidence sets for persistence diagrams Page 1 The Annals of Statistics 2014, Vol. 42, No.
6, 2301–2339 DOI: 10.1214/14-AOS1252 © Institute of Mathematical Statistics, 2014 …

Fréchet means for distributions of persistence diagrams

K Turner, Y Mileyko, S Mukherjee, J Harer - Discrete & Computational …, 2014 - Springer
Given a distribution ρ ρ on persistence diagrams and observations X_ 1, ..., X_ n ∼\limits^
iid ρ X 1,…, X n∼ iid ρ we introduce an algorithm in this paper that estimates a Fréchet …

Probability measures on the space of persistence diagrams

Y Mileyko, S Mukherjee, J Harer - Inverse Problems, 2011 - iopscience.iop.org
This paper shows that the space of persistence diagrams has properties that allow for the
definition of probability measures which support expectations, variances, percentiles and …

Persistent homology transform for modeling shapes and surfaces

K Turner, S Mukherjee, DM Boyer - Information and Inference: A …, 2014 - academic.oup.com
We introduce a statistic, the persistent homology transform (PHT), to model surfaces in and
shapes in. This statistic is a collection of persistence diagrams—multiscale topological …

Using persistent homology and dynamical distances to analyze protein binding

V Kovacev-Nikolic, P Bubenik, D Nikolić… - Statistical applications in …, 2016 - degruyter.com
Persistent homology captures the evolution of topological features of a model as a
parameter changes. The most commonly used summary statistics of persistent homology are …

Random geometric complexes

M Kahle - Discrete & Computational Geometry, 2011 - Springer
We study the expected topological properties of Čech and Vietoris–Rips complexes built on
random points in ℝ d. We find higher-dimensional analogues of known results for …

The persistence landscape and some of its properties

P Bubenik - Topological Data Analysis: The Abel Symposium 2018, 2020 - Springer
Persistence landscapes map persistence diagrams into a function space, which may often
be taken to be a Banach space or even a Hilbert space. In the latter case, it is a feature map …