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An introduction to topological data analysis: fundamental and practical aspects for data scientists
With the recent explosion in the amount, the variety, and the dimensionality of available
data, identifying, extracting, and exploiting their underlying structure has become a problem …
data, identifying, extracting, and exploiting their underlying structure has become a problem …
[PDF][PDF] Statistical topological data analysis using persistence landscapes.
P Bubenik - J. Mach. Learn. Res., 2015 - jmlr.org
We define a new topological summary for data that we call the persistence landscape. Since
this summary lies in a vector space, it is easy to combine with tools from statistics and …
this summary lies in a vector space, it is easy to combine with tools from statistics and …
[KÖNYV][B] Statistical shape analysis: with applications in R
A thoroughly revised and updated edition of this introduction to modern statistical methods
for shape analysis Shape analysis is an important tool in the many disciplines where objects …
for shape analysis Shape analysis is an important tool in the many disciplines where objects …
Confidence sets for persistence diagrams
Confidence sets for persistence diagrams Page 1 The Annals of Statistics 2014, Vol. 42, No.
6, 2301–2339 DOI: 10.1214/14-AOS1252 © Institute of Mathematical Statistics, 2014 …
6, 2301–2339 DOI: 10.1214/14-AOS1252 © Institute of Mathematical Statistics, 2014 …
Fréchet means for distributions of persistence diagrams
Given a distribution ρ ρ on persistence diagrams and observations X_ 1, ..., X_ n ∼\limits^
iid ρ X 1,…, X n∼ iid ρ we introduce an algorithm in this paper that estimates a Fréchet …
iid ρ X 1,…, X n∼ iid ρ we introduce an algorithm in this paper that estimates a Fréchet …
Probability measures on the space of persistence diagrams
This paper shows that the space of persistence diagrams has properties that allow for the
definition of probability measures which support expectations, variances, percentiles and …
definition of probability measures which support expectations, variances, percentiles and …
Persistent homology transform for modeling shapes and surfaces
We introduce a statistic, the persistent homology transform (PHT), to model surfaces in and
shapes in. This statistic is a collection of persistence diagrams—multiscale topological …
shapes in. This statistic is a collection of persistence diagrams—multiscale topological …
Using persistent homology and dynamical distances to analyze protein binding
V Kovacev-Nikolic, P Bubenik, D Nikolić… - Statistical applications in …, 2016 - degruyter.com
Persistent homology captures the evolution of topological features of a model as a
parameter changes. The most commonly used summary statistics of persistent homology are …
parameter changes. The most commonly used summary statistics of persistent homology are …
Random geometric complexes
M Kahle - Discrete & Computational Geometry, 2011 - Springer
We study the expected topological properties of Čech and Vietoris–Rips complexes built on
random points in ℝ d. We find higher-dimensional analogues of known results for …
random points in ℝ d. We find higher-dimensional analogues of known results for …
The persistence landscape and some of its properties
P Bubenik - Topological Data Analysis: The Abel Symposium 2018, 2020 - Springer
Persistence landscapes map persistence diagrams into a function space, which may often
be taken to be a Banach space or even a Hilbert space. In the latter case, it is a feature map …
be taken to be a Banach space or even a Hilbert space. In the latter case, it is a feature map …