Human organoids: model systems for human biology and medicine

J Kim, BK Koo, JA Knoblich - Nature reviews Molecular cell biology, 2020 - nature.com
The historical reliance of biological research on the use of animal models has sometimes
made it challenging to address questions that are specific to the understanding of human …

Advances in epigenetics link genetics to the environment and disease

G Cavalli, E Heard - Nature, 2019 - nature.com
Epigenetic research has accelerated rapidly in the twenty-first century, generating justified
excitement and hope, but also a degree of hype. Here we review how the field has evolved …

CRISPR engineering in organoids for gene repair and disease modelling

MH Geurts, H Clevers - Nature Reviews Bioengineering, 2023 - nature.com
Organoids bridge the gap between 2D cell lines and in vivo studies. With their 3D
organization and cellular heterogeneity, adult stem cell-derived organoids closely resemble …

Human gastric cancer modelling using organoids

T Seidlitz, SR Merker, A Rothe, F Zakrzewski… - Gut, 2019 - gut.bmj.com
Objective Gastric cancer is the second leading cause of cancer-related deaths and the fifth
most common malignancy worldwide. In this study, human and mouse gastric cancer …

One-step generation of tumor models by base editor multiplexing in adult stem cell-derived organoids

MH Geurts, S Gandhi, MG Boretto, N Akkerman… - Nature …, 2023 - nature.com
Optimization of CRISPR/Cas9-mediated genome engineering has resulted in base editors
that hold promise for mutation repair and disease modeling. Here, we demonstrate the …

METTL14 is a chromatin regulator independent of its RNA N6-methyladenosine methyltransferase activity

X Dou, L Huang, Y **ao, C Liu, Y Li, X Zhang… - Protein & …, 2023 - academic.oup.com
METTL3 and METTL14 are two components that form the core heterodimer of the main RNA
m6A methyltransferase complex (MTC) that installs m6A. Surprisingly, depletion of METTL3 …

[HTML][HTML] CRISPR-based adenine editors correct nonsense mutations in a cystic fibrosis organoid biobank

MH Geurts, E de Poel, GD Amatngalim, R Oka… - Cell stem cell, 2020 - cell.com
Adenine base editing (ABE) enables enzymatic conversion from AT into GC base pairs. ABE
holds promise for clinical application, as it does not depend on the introduction of double …

Patient-derived head and neck cancer organoids allow treatment stratification and serve as a tool for biomarker validation and identification

R Millen, WWB De Kort, M Koomen, GJF van Son… - Med, 2023 - cell.com
Background Organoids are in vitro three-dimensional structures that can be grown from
patient tissue. Head and neck cancer (HNC) is a collective term used for multiple tumor …

Epidermal growth factor receptor (EGFR) is a target of the tumor-suppressor E3 ligase FBXW7

M Boretto, MH Geurts, S Gandhi, Z Ma… - Proceedings of the …, 2024 - pnas.org
FBXW7 is an E3 ubiquitin ligase that targets proteins for proteasome-mediated degradation
and is mutated in various cancer types. Here, we use CRISPR base editors to introduce …

Tuft cells act as regenerative stem cells in the human intestine

L Huang, JH Bernink, A Giladi, D Krueger, GJF van Son… - Nature, 2024 - nature.com
In mice, intestinal tuft cells have been described as a long-lived, postmitotic cell type. Two
distinct subsets have been identified: tuft-1 and tuft-2 (ref.). By combining analysis of primary …