Assembled genome sequences are being generated at an exponential rate. Here we
present FCS-GX, part of NCBI's Foreign Contamination Screen (FCS) tool suite, optimized to …

Abstract The USA National Center for Biotechnology Information (NCBI) is one of the world's
most important sources of biological information. NCBI databases like PubMed and …

Drug discovery must be guided not only by medical need and commercial potential, but also
by the areas in which new science is creating therapeutic opportunities, such as target …

PRODORIC is worldwide one of the largest collections of prokaryotic transcription factor
binding sites from multiple bacterial sources with corresponding interpretation and …

Due to the recent explosion of the amount of on-line accessible biomedical data and tools,
finding and retrieving the relevant information is not an easy task. The vision of a Semantic …

Abstract Motivation Gene Expression Omnibus (GEO) and other publicly available data store
their metadata in the format of unstructured English text, which is very difficult for automated …

Background There are now a multitude of articles published in a diversity of journals
providing information about genes, proteins, pathways, and diseases. Each article …

Abstract Background SSWAP (S imple S emantic W eb A rchitecture and P rotocol;
pronounced" swap") is an architecture, protocol, and platform for using reasoning to …

Science blogs, Twitter commentary, and comments on journal websites represent an
immediate response to journal articles, and may help in identifying relevant publications …

The amount of gene expression data in international repositories has grown exponentially.
An important first step in translating the results of genomic experiments into medicine is to …