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Using PyMOL as a platform for computational drug design
PyMOL, a cross‐platform molecular graphics tool, has been widely used for three‐
dimensional (3D) visualization of proteins, nucleic acids, small molecules, electron …
dimensional (3D) visualization of proteins, nucleic acids, small molecules, electron …
Artificial intelligence, big data and machine learning approaches in precision medicine & drug discovery
Artificial Intelligence revolutionizes the drug development process that can quickly identify
potential biologically active compounds from millions of candidate within a short period. The …
potential biologically active compounds from millions of candidate within a short period. The …
DrugRep: an automatic virtual screening server for drug repurposing
J Gan, J Liu, Y Liu, S Chen, W Dai, ZX **ao… - Acta Pharmacologica …, 2023 - nature.com
Computationally identifying new targets for existing drugs has drawn much attention in drug
repurposing due to its advantages over de novo drugs, including low risk, low costs, and …
repurposing due to its advantages over de novo drugs, including low risk, low costs, and …
An overview of molecular fingerprint similarity search in virtual screening
I Muegge, P Mukherjee - Expert opinion on drug discovery, 2016 - Taylor & Francis
Introduction: A central premise of medicinal chemistry is that structurally similar molecules
exhibit similar biological activities. Molecular fingerprints encode properties of small …
exhibit similar biological activities. Molecular fingerprints encode properties of small …
A comprehensive review of cholinesterase modeling and simulation
D De Boer, N Nguyen, J Mao, J Moore, EJ Sorin - Biomolecules, 2021 - mdpi.com
The present article reviews published efforts to study acetylcholinesterase and
butyrylcholinesterase structure and function using computer-based modeling and simulation …
butyrylcholinesterase structure and function using computer-based modeling and simulation …
Structure-based design of selective, orally available salt-inducible kinase inhibitors that stimulate bone formation in mice
Osteoporosis is a major public health problem. Currently, there are no orally available
therapies that increase bone formation. Intermittent parathyroid hormone (PTH) stimulates …
therapies that increase bone formation. Intermittent parathyroid hormone (PTH) stimulates …
A mechanistic investigation on kokumi-active γ-Glutamyl tripeptides–A computational study to understand molecular basis of their activity and to identify novel potential …
L Dellafiora, F Magnaghi, G Galaverna… - Food Research …, 2022 - Elsevier
Kokumi is an important taste perception whose chemical basis still needs clarifications and
for which the development of high-throughput tools of analysis is desirable. The activation of …
for which the development of high-throughput tools of analysis is desirable. The activation of …
Insight into antioxidant-like activity and computational exploration of identified bioactive compounds in Talinum triangulare (Jacq.) aqueous extract as potential …
Background Recent reports have highlighted the significance of plant bioactive components
in drug development targeting neurodegenerative disorders such as Alzheimer's disease …
in drug development targeting neurodegenerative disorders such as Alzheimer's disease …
Drug design for CNS diseases: polypharmacological profiling of compounds using cheminformatic, 3D-QSAR and virtual screening methodologies
HIGHLIGHTS Many CNS targets are being explored for multi-target drug design New
databases and cheminformatic methods enable prediction of primary pharmaceutical target …
databases and cheminformatic methods enable prediction of primary pharmaceutical target …
ProBiS-Dock Database: a web server and interactive web repository of small ligand–protein binding sites for drug design
We have developed a new system, ProBiS-Dock, which can be used to determine the
different types of protein binding sites for small ligands. The binding sites identified this way …
different types of protein binding sites for small ligands. The binding sites identified this way …